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GO Report
ID | GO:0005654 |
---|---|
Name | nucleoplasm |
Type | cellular component |
No. of Genes in BDgene | 163 |
Source | Pathway by Database Search |
Approved Symbol | Approved Name | Location | No. of Studies (Positive/Negative/Trend) | Evidence[PMID] |
---|---|---|---|---|
CUL1 | cullin 1 | 7q36.1 | 1(1/0/0) | TAS |
IRF2BP2 | interferon regulatory factor 2 binding protein 2 | 1q42.3 | 1(0/1/0) | IDA |
FKBP5 | FK506 binding protein 5 | 6p21.31 | 5(1/4/0) | IDA |
POLE2 | polymerase (DNA directed), epsilon 2, accessory subunit | 14q21-q22 | 1(1/0/0) | IDA; TAS |
TNR | tenascin R | 1q24 | 2(0/2/0) | IDA |
CLOCK | clock circadian regulator | 4q12 | 12(5/7/0) | IDA |
NAV2 | neuron navigator 2 | 11p15.1 | 1(1/0/0) | IDA |
NIPBL | Nipped-B homolog (Drosophila) | 5p13.2 | 1(0/1/0) | TAS |
HNF4A | hepatocyte nuclear factor 4, alpha | 20q13.12 | 1(1/0/0) | TAS |
TCF7L2 | transcription factor 7-like 2 (T-cell specific, HMG-box) | 10q25.3 | 1(1/0/0) | IDA; TAS |
CDC25B | cell division cycle 25B | 20p13 | 1(0/1/0) | IDA; TAS |
CDK13 | cyclin-dependent kinase 13 | 7p14.1 | 1(1/0/0) | IDA |
IRF2 | interferon regulatory factor 2 | 4q34.1-q35.1 | 1(1/0/0) | IDA; TAS |
PHF20 | PHD finger protein 20 | 20q11.22-q11.23 | 1(0/1/0) | IDA; TAS |
MsrA | methionine sulfoxide reductase A | 8p23.1 | 1(1/0/0) | IDA |
NOTCH4 | notch 4 | 6p21.3 | 2(0/2/0) | TAS |
OPA1 | optic atrophy 1 (autosomal dominant) | 3q29 | 1(0/1/0) | IDA |
GTF3C5 | general transcription factor IIIC, polypeptide 5, 63kDa | 9q34.13 | 1(0/1/0) | TAS |
ZRANB1 | zinc finger, RAN-binding domain containing 1 | 10q26.12 | 1(1/0/0) | IDA |
SPRED1 | sprouty-related, EVH1 domain containing 1 | 15q14 | 2(0/1/1) | IDA |
NR1D1 | nuclear receptor subfamily 1, group D, member 1 | 17q11.2 | 6(2/4/0) | TAS |
BCL9 | B-cell CLL/lymphoma 9 | 1q21 | 1(1/0/0) | TAS |
DCAF6 | DDB1 and CUL4 associated factor 6 | 1q23.3 | 1(0/1/0) | IDA |
MAGI1 | membrane associated guanylate kinase, WW and PDZ domain containing 1 | 3p14.1 | 1(1/0/0) | IDA |
KMT2E | lysine (K)-specific methyltransferase 2E | 7q22.1 | 1(0/0/1) | IDA; TAS |
MPPE1 | metallophosphoesterase 1 | 18p11.21 | 2(2/0/0) | IDA |
NCAPD3 | non-SMC condensin II complex, subunit D3 | 11q25 | 1(1/0/0) | TAS |
ERBB4 | erb-b2 receptor tyrosine kinase 4 | 2q33.3-q34 | 2(1/1/0) | TAS |
FYTTD1 | forty-two-three domain containing 1 | 3q29 | 1(0/1/0) | IDA |
NR3C1 | nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) | 5q31-q32 | 5(2/3/0) | IDA; TAS |
SLU7 | SLU7 splicing factor homolog (S. cerevisiae) | 5q33.3 | 1(0/0/1) | IDA |
NAA38 | N(alpha)-acetyltransferase 38, NatC auxiliary subunit | 17p13.1 | 1(1/0/0) | IDA |
RCOR1 | REST corepressor 1 | 14q32.33 | 1(0/1/0) | IDA; TAS |
NUP214 | nucleoporin 214kDa | 9q34 | 1(0/1/0) | TAS |
NOTCH3 | notch 3 | 19p13.2-p13.1 | 1(0/1/0) | IDA; TAS |
LPIN1 | lipin 1 | 2p25.1 | 1(0/0/1) | TAS |
ZBED4 | zinc finger, BED-type containing 4 | 22q13.33 | 1(1/0/0) | IDA |
ZNF74 | zinc finger protein 74 | 22q11.2 | 1(0/1/0) | IDA |
HOXA3 | homeobox A3 | 7p15.2 | 1(1/0/0) | IDA |
PPARGC1B | peroxisome proliferator-activated receptor gamma, coactivator 1 beta | 5q33.1 | 1(1/0/0) | TAS |
GSK3B | glycogen synthase kinase 3 beta | 3q13.3 | 8(0/8/0) | IDA |
PRKACB | protein kinase, cAMP-dependent, catalytic, beta | 1p36.1 | 1(0/1/0) | TAS |
TEAD1 | TEA domain family member 1 (SV40 transcriptional enhancer factor) | 11p15.4 | 1(0/1/0) | IDA; TAS |
PRIM2 | primase, DNA, polypeptide 2 (58kDa) | 6p12-p11.1 | 1(0/0/1) | TAS |
NR2E1 | nuclear receptor subfamily 2, group E, member 1 | 6q21 | 1(1/0/0) | TAS |
XBP1 | X-box binding protein 1 | 22q12.1 | 3(2/1/0) | TAS |
SIRT1 | sirtuin 1 | 10q21 | 1(0/1/0) | IDA; TAS |
TIPIN | TIMELESS interacting protein | 15q22.31 | 2(0/2/0) | IDA |
NUDCD1 | NudC domain containing 1 | 8q23 | 1(0/1/0) | IDA |
INTS9 | integrator complex subunit 9 | 8p21.1 | 1(1/0/0) | IDA |
HSP90AA1 | heat shock protein 90kDa alpha (cytosolic), class A member 1 | 14q32.33 | 1(1/0/0) | IDA; TAS |
DUSP6 | dual specificity phosphatase 6 | 12q22-q23 | 5(3/2/0) | TAS |
ADARB1 | adenosine deaminase, RNA-specific, B1 | 21q22.3 | 1(0/1/0) | IDA; TAS |
ADAM12 | ADAM metallopeptidase domain 12 | 10q26 | 1(1/0/0) | IDA |
SIVA1 | SIVA1, apoptosis-inducing factor | 14q32.33 | 1(0/1/0) | IDA[15034012] |
SP4 | Sp4 transcription factor | 7p15 | 1(1/0/0) | IDA |
PHF8 | PHD finger protein 8 | Xp11.22 | 1(0/0/1) | TAS |
KIAA1009 | centrosomal protein 162kDa | 6q14.3 | 0 | IDA |
PPARD | peroxisome proliferator-activated receptor delta | 6p21.2 | 1(1/0/0) | TAS |
AEBP2 | AE binding protein 2 | 12p12.3 | 1(1/0/0) | TAS |
NEK7 | NIMA-related kinase 7 | 1q31.3 | 2(0/1/1) | IDA |
TRRAP | transformation/transcription domain-associated protein | 7q21.2-q22.1 | 1(0/1/0) | IDA; TAS |
CGRRF1 | cell growth regulator with ring finger domain 1 | 14q22.2 | 1(0/1/0) | IDA |
HDAC9 | histone deacetylase 9 | 7p21.1 | 1(1/0/0) | TAS |
HES1 | hes family bHLH transcription factor 1 | 3q28-q29 | 1(0/1/0) | IDA; TAS |
FOXO3 | forkhead box O3 | 6q21 | 1(1/0/0) | IDA; TAS |
DHX15 | DEAH (Asp-Glu-Ala-His) box helicase 15 | 4p15.3 | 1(1/0/0) | IDA |
TLE4 | transducin-like enhancer of split 4 | 9q21.32 | 2(1/1/0) | TAS |
RPTOR | regulatory associated protein of MTOR, complex 1 | 17q25.3 | 2(1/1/0) | IDA; TAS |
PSMB9 | proteasome (prosome, macropain) subunit, beta type, 9 | 6p21.3 | 1(1/0/0) | TAS |
KPNA5 | karyopherin alpha 5 (importin alpha 6) | 6q22.2 | 1(1/0/0) | TAS |
ZHX2 | zinc fingers and homeoboxes 2 | 8q24.13 | 1(0/0/1) | IDA |
ANO2 | anoctamin 2, calcium activated chloride channel | 12p13.3 | 1(0/1/0) | IDA |
NR3C2 | nuclear receptor subfamily 3, group C, member 2 | 4q31 | 1(1/0/0) | TAS |
TPX2 | TPX2, microtubule-associated | 20q11.2 | 1(1/0/0) | IDA |
GLI2 | GLI family zinc finger 2 | 2q14 | 1(0/1/0) | TAS |
TBP | TATA box binding protein | 6q27 | 1(0/1/0) | IDA; TAS |
INA | internexin neuronal intermediate filament protein, alpha | 10q24 | 1(0/1/0) | IDA |
RAD51B | RAD51 paralog B | 14q23-q24.2 | 1(0/1/0) | TAS |
INTS6 | integrator complex subunit 6 | 13q14.3 | 1(1/0/0) | IDA |
DGCR8 | DGCR8 microprocessor complex subunit | 22q11.2 | 2(1/0/1) | IDA; TAS |
CAMK2A | calcium/calmodulin-dependent protein kinase II alpha | 5q32 | 2(1/1/0) | TAS |
GNL3 | guanine nucleotide binding protein-like 3 (nucleolar) | 3p21.1 | 2(2/0/0) | IEA |
BRD1 | bromodomain containing 1 | 22q13.33 | 2(2/0/0) | IDA |
PAX8 | paired box 8 | 2q13 | 1(0/0/1) | IDA; ISS |
IRF8 | interferon regulatory factor 8 | 16q24.1 | 1(1/0/0) | IDA |
CREBBP | CREB binding protein | 16p13.3 | 1(0/1/0) | IDA; TAS |
EGR1 | early growth response 1 | 5q23-q31 | 1(0/1/0) | IDA; TAS |
MED12 | mediator complex subunit 12 | Xq13 | 1(0/1/0) | IDA; TAS |
ZBTB20 | zinc finger and BTB domain containing 20 | 3q13.2 | 1(0/1/0) | IDA |
TCF7L1 | transcription factor 7-like 1 (T-cell specific, HMG-box) | 2p11.2 | 1(0/1/0) | TAS |
HNRNPC | heterogeneous nuclear ribonucleoprotein C (C1/C2) | 14q11.2 | 1(0/1/0) | IDA; TAS |
CBR3 | carbonyl reductase 3 | 21q22.2 | 1(0/0/1) | IDA |
PPP2R5D | protein phosphatase 2, regulatory subunit B', delta | 6p21.1 | 1(1/0/0) | TAS |
PSPC1 | paraspeckle component 1 | 13q11 | 1(0/1/0) | IDA |
ATXN1 | ataxin 1 | 6p23 | 2(1/1/0) | IDA |
SURF6 | surfeit 6 | 9q33-q34 | 1(0/1/0) | IEA |
BCL11A | B-cell CLL/lymphoma 11A (zinc finger protein) | 2p16.1 | 1(1/0/0) | IDA |
NR4A2 | nuclear receptor subfamily 4, group A, member 2 | 2q22-q23 | 1(0/1/0) | IDA; TAS |
SPR | sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase) | 2p14-p12 | 1(1/0/0) | IDA |
MYO18B | myosin XVIIIB | 22q12.1 | 2(0/2/0) | IDA |
OPTN | optineurin | 10p14 | 1(0/0/1) | TAS |
THRA | thyroid hormone receptor, alpha | 17q21.1 | 1(1/0/0) | TAS |
AKT1 | v-akt murine thymoma viral oncogene homolog 1 | 14q32.33 | 3(3/0/0) | IDA; TAS |
NCOR2 | nuclear receptor corepressor 2 | 12q24 | 1(0/1/0) | IDA; TAS |
AHR | aryl hydrocarbon receptor | 7p15 | 1(1/0/0) | IDA |
GLI3 | GLI family zinc finger 3 | 7p13 | 1(1/0/0) | TAS |
TRIM24 | tripartite motif containing 24 | 7q32-q34 | 1(1/0/0) | IDA |
RPA3 | replication protein A3, 14kDa | 7p21.3 | 1(1/0/0) | TAS |
LSM11 | LSM11, U7 small nuclear RNA associated | 5q33.3 | 1(1/0/0) | IDA; TAS |
ID1 | inhibitor of DNA binding 1, dominant negative helix-loop-helix protein | 20q11 | 1(0/0/1) | IDA; TAS |
FAM20B | family with sequence similarity 20, member B | 1q25.2 | 1(0/1/0) | IDA |
MTMR3 | myotubularin related protein 3 | 22q12.2 | 1(0/1/0) | IDA |
NPAS3 | neuronal PAS domain protein 3 | 14q13.1 | 2(1/1/0) | IDA |
MAPK10 | mitogen-activated protein kinase 10 | 4q22-q23 | 1(0/1/0) | TAS |
GEMIN2 | gem (nuclear organelle) associated protein 2 | 14q21.1 | 1(0/1/0) | TAS |
PPP2R2A | protein phosphatase 2, regulatory subunit B, alpha | 8p21.2 | 1(0/1/0) | TAS |
PER2 | period circadian clock 2 | 2q37.3 | 7(1/6/0) | IDA |
GNAI2 | guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2 | 3p21.31 | 1(0/1/0) | IDA |
KAT6B | K(lysine) acetyltransferase 6B | 10q22.2 | 1(1/0/0) | TAS |
ATF4 | activating transcription factor 4 | 22q13.1 | 1(1/0/0) | TAS |
BRCA2 | breast cancer 2, early onset | 13q12-q13 | 1(1/0/0) | IDA; TAS |
ABCG1 | ATP-binding cassette, sub-family G (WHITE), member 1 | 21q22.3 | 1(0/1/0) | IDA |
ESR1 | estrogen receptor 1 | 6q24-q27 | 1(0/1/0) | TAS |
ELK3 | ELK3, ETS-domain protein (SRF accessory protein 2) | 12q23 | 1(0/1/0) | IDA |
CABIN1 | calcineurin binding protein 1 | 22q11.23 | 1(0/0/1) | IDA; TAS |
UBXN7 | UBX domain protein 7 | 3q29 | 1(0/1/0) | IDA |
XRCC4 | X-ray repair complementing defective repair in Chinese hamster cells 4 | 5q14.2 | 1(0/1/0) | IDA; TAS |
ATF5 | activating transcription factor 5 | 19q13.33 | 1(0/1/0) | IDA |
GCH1 | GTP cyclohydrolase 1 | 14q22.1-q22.2 | 2(1/1/0) | IDA |
CREB1 | cAMP responsive element binding protein 1 | 2q34 | 2(1/1/0) | IDA; TAS |
NRIP1 | nuclear receptor interacting protein 1 | 21q11.2 | 1(0/1/0) | IDA |
CHD1L | chromodomain helicase DNA binding protein 1-like | 1q21.1 | 1(1/0/0) | IDA |
HSPA1A | heat shock 70kDa protein 1A | 6p21.3 | 2(2/0/0) | TAS |
SYNE1 | spectrin repeat containing, nuclear envelope 1 | 6q25.2 | 6(3/2/1) | IDA |
PRKAG2 | protein kinase, AMP-activated, gamma 2 non-catalytic subunit | 7q35-q36 | 1(1/0/0) | TAS |
ZNF274 | zinc finger protein 274 | 19q13.43 | 2(1/1/0) | IDA |
ERCC4 | excision repair cross-complementation group 4 | 16p13.3 | 1(0/0/1) | TAS |
MED15 | mediator complex subunit 15 | 22q11.2 | 1(0/1/0) | IDA; TAS |
RUVBL2 | RuvB-like AAA ATPase 2 | 19q13.3 | 1(1/0/0) | IDA; TAS |
CDKN2A | cyclin-dependent kinase inhibitor 2A | 9p21 | 1(1/0/0) | IDA[10360174]; TAS |
FGFR2 | fibroblast growth factor receptor 2 | 10q25.3-q26 | 2(1/1/0) | IDA |
ZMIZ1 | zinc finger, MIZ-type containing 1 | 10q22.3 | 1(0/1/0) | IDA |
RORB | RAR-related orphan receptor B | 9q22 | 4(3/1/0) | TAS |
MBNL1 | muscleblind-like splicing regulator 1 | 3q25 | 1(1/0/0) | IDA |
KAT5 | K(lysine) acetyltransferase 5 | 11q13 | 2(0/2/0) | IDA; TAS |
NCBP2 | nuclear cap binding protein subunit 2, 20kDa | 3q29 | 1(0/1/0) | IDA; TAS |
POLN | polymerase (DNA directed) nu | 4p16.3 | 1(0/0/1) | IDA |
MAP2K6 | mitogen-activated protein kinase kinase 6 | 17q | 1(0/1/0) | TAS |
ARID1B | AT rich interactive domain 1B (SWI1-like) | 6q25.3 | 1(0/0/1) | IDA |
ALKBH8 | alkB, alkylation repair homolog 8 (E. coli) | 11q22.3 | 1(0/1/0) | IDA |
NUP107 | nucleoporin 107kDa | 12q14 | 1(1/0/0) | IDA |
RORA | RAR-related orphan receptor A | 15q21-q22 | 3(2/1/0) | TAS |
STK24 | serine/threonine kinase 24 | 13q31.2-q32.3 | 2(1/1/0) | TAS |
TPP2 | tripeptidyl peptidase II | 13q32-q33 | 2(1/1/0) | IDA |
PALB2 | partner and localizer of BRCA2 | 16p12.1 | 5(2/2/1) | IDA; TAS |
HS6ST2 | heparan sulfate 6-O-sulfotransferase 2 | Xq26.2 | 1(0/0/1) | IDA |
HTT | huntingtin | 4p16.3 | 1(0/0/1) | IDA |
TACC2 | transforming, acidic coiled-coil containing protein 2 | 10q26 | 1(1/0/0) | IDA |
MTOR | mechanistic target of rapamycin (serine/threonine kinase) | 1p36 | 1(0/0/1) | TAS |
BDH1 | 3-hydroxybutyrate dehydrogenase, type 1 | 3q29 | 2(1/1/0) | IDA |
NFIA | nuclear factor I/A | 1p31.3-p31.2 | 1(0/1/0) | IDA |
PPP3CB | protein phosphatase 3, catalytic subunit, beta isozyme | 10q22.2 | 2(1/1/0) | TAS |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
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Last update: March 31, 2016