BDgene

Gene Report

Basic Info
Approved Symbol LPIN1
Symbol Alias KIAA0188
Approved Name lipin 1
Location 2p25.1
Position chr2:11677595-11827409, 1
External Links HGNC: 13345
Entrez Gene: 23175
Ensembl: ENSG00000134324
UCSC: uc010yjm.3
No. of Studies 1 (Positive: 0; Negative: 0; trend: 1)
Overlap with SZ? NO
Overlap with MDD? NO
Gene related studies (count: 1)
Reference Tested Markers Statistical Values/Author Comments Result Category Comment on Study
Hamshere, M. L.,2009 SNP: rs4027132 the nearest gene of one independently associated SNP rs4027132 that exceed a significance threshold of P-value E-05(all of which have good quality clusterplots) Trend Comment on Study
Gene functional annotation
Gene related GO terms (count: 37)

GO terms by PBA (count: 1)

GO terms by database search (count: 36)


Gene related KEGG pathways (count: 0)

Gene related BioCarta pathways (count: 0)

Gene related interactors from protein-protein interactions data in HPRD (count: 0)

Related other genetic factors
Gene related SNPs (count: 2)

Literature-origin SNPs (count: 1)

LD-proxies (count: 1)


Gene related CNVs (count: 0)

Gene related other variants (count: 0)

Gene related regions (count: 4)

Overlap with schizophrenia (SZ) and major depressive disorder (MDD)
Gene relationship with SZ

Gene relationship with MDD

View in gBrowse

Region: chr2:11677595..11827409 View in gBrowse
View in gBrowse