Gene Report

Basic Info
Approved Symbol BCL9
Approved Name B-cell CLL/lymphoma 9
Location 1q21
Position chr1:147541412-147626216, 1
External Links HGNC: 1008
Entrez Gene: 607
Ensembl: ENSG00000116128
UCSC: uc031uul.1
No. of Studies 1 (Positive: 1; Negative: 0; trend: 0)
Overlap with SZ? YES
Overlap with MDD? YES
Gene related studies (count: 1)
Reference Tested Markers Statistical Values/Author Comments Result Category Comment on Study
Li, J.,2011(b) SNP: rs10494251, rs1240083, rs1541187, rs2236570, rs3766512, rs671056, rs672607, rs688325, rs9326555, rs946903 These findings indicate that common variations in the BCL9 gene confer risk of schizophrenia and may also be associated with bipolar disorder and major depressive disorder in the Chinese Han population. Positive Comment on Study
Gene functional annotation
Gene related GO terms (count: 11)

GO terms by PBA (count: 0)

GO terms by database search (count: 11)

Gene related KEGG pathways (count: 0)

Gene related BioCarta pathways (count: 0)

Gene related interactors from protein-protein interactions data in HPRD (count: 3)

Related other genetic factors
Gene related SNPs (count: 70)

Literature-origin SNPs (count: 10)

LD-proxies (count: 60)

Gene related CNVs (count: 1)

Gene related other variants (count: 0)

Gene related regions (count: 3)

Overlap with schizophrenia (SZ) and major depressive disorder (MDD)
Gene relationship with SZ

Overlap with SZ from cross-disorder studies (count: 1)

Overlap with SZ from candidate gene intersection analysis (count: 0)

Gene relationship with MDD

Overlap with MDD from cross-disorder studies (count: 1)

Overlap with MDD from candidate gene intersection analysis (count: 0)

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Region: chr1:147541412..147626216 View in gBrowse
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