BDgene

Gene Report

Basic Info
Approved Symbol FAM20B
Symbol Alias KIAA0475, GXK1
Approved Name family with sequence similarity 20, member B
Name Alias glycosaminoglycan xylosylkinase
Location 1q25.2
Position chr1:179025804-179076562, 1
External Links HGNC: 23017
Entrez Gene: 9917
Ensembl: ENSG00000116199
UCSC: uc001gmc.3
No. of Studies 1 (Positive: 0; Negative: 1; trend: 0)
Overlap with SZ? YES
Overlap with MDD? YES
Gene related studies (count: 1)
Reference Tested Markers Statistical Values/Author Comments Result Category Comment on Study
Huang, J.,2010 SNP: rs4271171 No significant association of this gene was observed in BD. Negative Comment on Study
Gene functional annotation
Gene related GO terms (count: 9)

GO terms by PBA (count: 1)

GO terms by database search (count: 8)


Gene related KEGG pathways (count: 0)

Gene related BioCarta pathways (count: 0)

Gene related interactors from protein-protein interactions data in HPRD (count: 0)

Related other genetic factors
Gene related SNPs (count: 1)

Literature-origin SNPs (count: 1)

LD-proxies (count: 0)


Gene related CNVs (count: 0)

Gene related other variants (count: 0)

Gene related regions (count: 2)

Overlap with schizophrenia (SZ) and major depressive disorder (MDD)
Gene relationship with SZ

Overlap with SZ from cross-disorder studies (count: 1)

Overlap with SZ from candidate gene intersection analysis (count: 0)


Gene relationship with MDD

Overlap with MDD from cross-disorder studies (count: 1)

Overlap with MDD from candidate gene intersection analysis (count: 0)


View in gBrowse

Region: chr1:179025804..179076562 View in gBrowse
View in gBrowse