Gene Report

Basic Info
Approved Symbol |
TBP
|
Previous Symbol |
GTF2D1, SCA17 |
Symbol Alias |
TFIID |
Approved Name |
TATA box binding protein |
Location |
6q27 |
Position |
chr6:170554302-170572870, 1 |
External Links |
HGNC: 11588
Entrez Gene: 6908
Ensembl: ENSG00000112592
UCSC: uc003qxu.3
|
No. of Studies |
1 (Positive: 0; Negative: 1; trend: 0)
|
Overlap with SZ? |
YES
|
Overlap with MDD? |
NO
|

Gene related studies (count: 1)

Gene functional annotation

Gene related GO terms (count: 29)

Gene related KEGG pathways (count: 1)
KEGG pathways by PBA (count: 0)
KEGG pathways by database search (count: 1)


Gene related BioCarta pathways (count: 2)
BioCarta pathways by PBA (count: 0)
BioCarta pathways by database search (count: 2)


Gene related interactors from protein-protein interactions data in HPRD (count: 76)
Gene |
Interactor |
Interactor in BDgene? |
Experiment Type |
PMID |
TBP |
NCOA1
|
NO
|
in vitro |
8754792
|
TBP |
UBTF
|
NO
|
in vivo |
8552083
|
TBP |
PAX6
|
NO
|
in vitro;in vivo |
10359315
|
TBP |
TAF1A
|
NO
|
in vitro;in vivo;yeast 2-hybrid |
7801123
,
15315821
|
TBP |
POU2F2
|
YES
|
in vitro;in vivo |
8202368
|
TBP |
JUND
|
NO
|
in vitro |
7848298
|
TBP |
RELA
|
NO
|
in vitro |
9584164
,
7706261
|
TBP |
TAF11
|
NO
|
in vitro;in vivo |
7729427
|
TBP |
MSX1
|
NO
|
in vivo |
8700832
,
10215616
|
TBP |
ZNF76
|
YES
|
yeast 2-hybrid |
16522640
|
TBP |
DR1
|
NO
|
in vitro |
11461703
|
TBP |
SNAPC4
|
NO
|
in vitro |
12621023
|
TBP |
SNAPC2
|
NO
|
in vitro |
8633057
|
TBP |
GTF2A1
|
NO
|
in vitro |
8006019
|
TBP |
TP53
|
NO
|
in vitro |
1465435
|
TBP |
POU2F1
|
NO
|
in vitro;in vivo |
8202368
|
TBP |
BRF1
|
NO
|
in vitro;in vivo;yeast 2-hybrid |
7624363
,
10921893
,
16713569
|
TBP |
RUVBL1
|
NO
|
in vitro |
9843967
|
TBP |
RB1
|
NO
|
in vitro |
11094070
|
TBP |
TAF10
|
NO
|
in vitro |
7923369
|
TBP |
MCM2
|
NO
|
in vitro |
12392551
|
TBP |
NFYB
|
NO
|
in vitro;in vivo |
9153318
|
TBP |
DRAP1
|
NO
|
in vitro;in vivo |
11461703
|
TBP |
GTF2E2
|
NO
|
in vitro |
9677423
,
11113176
|
TBP |
TAF5
|
NO
|
in vitro;in vivo |
9045704
|
TBP |
CREG1
|
NO
|
in vitro |
9710587
|
TBP |
SNAPC1
|
NO
|
in vitro |
8524284
|
TBP |
BTAF1
|
NO
|
in vitro;in vivo |
9488487
|
TBP |
SUB1
|
NO
|
in vitro |
9482861
|
TBP |
DHX9
|
NO
|
in vivo |
11149922
|
TBP |
TAF1
|
NO
|
in vitro |
7680771
|
TBP |
SPIB
|
NO
|
in vitro |
10196196
|
TBP |
NCOA3
|
NO
|
in vitro |
9267036
|
TBP |
TAF12
|
NO
|
in vitro |
7729427
|
TBP |
CXXC1
|
NO
|
yeast 2-hybrid |
16713569
|
TBP |
PIAS1
|
NO
|
in vivo;yeast 2-hybrid |
16522640
|
TBP |
FOS
|
NO
|
in vivo |
7685215
|
TBP |
TAF7L
|
NO
|
in vivo |
12665565
|
TBP |
HTT
|
YES
|
in vitro |
10410676
|
TBP |
PIAS3
|
NO
|
yeast 2-hybrid |
16522640
|
TBP |
PAX5
|
NO
|
in vitro;in vivo |
10197586
|
TBP |
BRF2
|
NO
|
in vitro;in vivo |
11564744
|
TBP |
KDM5A
|
NO
|
in vitro |
7935440
|
TBP |
HAP1
|
NO
|
yeast 2-hybrid |
16713569
|
TBP |
PSMC2
|
NO
|
in vivo |
11118327
|
TBP |
TRAM2
|
NO
|
in vivo |
14612417
|
TBP |
GTF2A2
|
NO
|
in vitro;in vivo |
7958900
,
9603936
,
7724559
|
TBP |
EMID2
|
NO
|
yeast 2-hybrid |
16713569
|
TBP |
TRIP4
|
NO
|
in vitro |
10454579
|
TBP |
EDF1
|
NO
|
in vivo |
10816571
|
TBP |
GTF3C3
|
NO
|
in vitro;in vivo |
10373544
|
TBP |
WDR62
|
NO
|
yeast 2-hybrid |
16169070
|
TBP |
GTF2F2
|
NO
|
in vitro |
8577725
|
TBP |
NACA
|
NO
|
in vitro;in vivo |
8835540
|
TBP |
TAF13
|
NO
|
in vitro;yeast 2-hybrid |
7729427
|
TBP |
MYC
|
NO
|
in vivo |
15723054
|
TBP |
TAF1B
|
NO
|
in vitro |
7801123
|
TBP |
ABT1
|
NO
|
in vitro;in vivo |
10648625
|
TBP |
IKZF1
|
NO
|
in vitro |
11959865
|
TBP |
MDM2
|
NO
|
in vitro;in vivo |
9388200
|
TBP |
SP1
|
NO
|
yeast 2-hybrid |
12753906
|
TBP |
GTF2E1
|
NO
|
in vitro |
11113176
|
TBP |
HMGB1
|
NO
|
in vitro |
9880542
|
TBP |
RXRA
|
NO
|
in vitro;in vivo;yeast 2-hybrid |
7667283
|
TBP |
SPI1
|
NO
|
in vitro |
8434021
|
TBP |
CAND2
|
NO
|
in vitro |
10441524
|
TBP |
TAF1L
|
NO
|
yeast 2-hybrid |
12217962
|
TBP |
BCL3
|
NO
|
in vitro |
9812988
|
TBP |
TAF1C
|
NO
|
in vitro |
7801123
|
TBP |
HNRNPK
|
NO
|
in vitro |
8628302
|
TBP |
GTF2B
|
NO
|
in vitro;in vivo |
14963322
,
8006019
|
TBP |
FATE1
|
NO
|
yeast 2-hybrid |
16713569
|
TBP |
HSF1
|
NO
|
in vitro;in vivo |
11005381
|
TBP |
JUN
|
NO
|
in vitro |
7848298
,
16055710
|
TBP |
REL
|
NO
|
in vitro |
8413269
|
TBP |
FOXF2
|
NO
|
in vitro |
9722567
|

Related other genetic factors

Overlap with schizophrenia (SZ) and major depressive disorder (MDD)

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