Gene Report

Basic Info
Approved Symbol TNR
Approved Name tenascin R
Name Alias restrictin, "janusin"
Location 1q24
Position chr1:175315194-175743770, -1
External Links HGNC: 11953
Entrez Gene: 7143
Ensembl: ENSG00000116147
UCSC: uc009wwu.1
No. of Studies 2 (Positive: 0; Negative: 2; trend: 0)
Overlap with SZ? NO
Overlap with MDD? NO
Gene related studies (count: 2)
Reference Tested Markers Statistical Values/Author Comments Result Category Comment on Study
Green, E. K.,2012 SNP: rs875326 BD ImmunoChip:P-value = 0.378,OR = 0.945;ImmunoChip, PGC-BD combined data:P-balue = 0.00105,OR = 1.078 No significant association was observed. Negative Comment on Study
Sklar, P.,2011 SNP: rs875326 No significant association was observed. Negative Comment on Study
Gene functional annotation
Gene related GO terms (count: 23)

GO terms by PBA (count: 3)

GO terms by database search (count: 20)

Gene related KEGG pathways (count: 3)

KEGG pathways by PBA (count: 2)

KEGG pathways by database search (count: 1)

Gene related BioCarta pathways (count: 0)

Gene related interactors from protein-protein interactions data in HPRD (count: 5)

Related other genetic factors
Gene related SNPs (count: 7)

Literature-origin SNPs (count: 1)

LD-proxies (count: 6)

Gene related CNVs (count: 0)

Gene related other variants (count: 0)

Gene related regions (count: 3)

Overlap with schizophrenia (SZ) and major depressive disorder (MDD)
Gene relationship with SZ

Gene relationship with MDD

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Region: chr1:175315194..175743770 View in gBrowse
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