Gene Report

Basic Info
Approved Symbol LSM11
Symbol Alias FLJ38273
Approved Name LSM11, U7 small nuclear RNA associated
Previous Name LSM11 homolog, U7 small nuclear RNA associated (S. cerevisiae)
Location 5q33.3
Position chr5:157743695-157760709, 1
External Links HGNC: 30860
Entrez Gene: 134353
Ensembl: ENSG00000155858
UCSC: uc003lxe.1
No. of Studies 1 (Positive: 1; Negative: 0; trend: 0)
Overlap with SZ? NO
Overlap with MDD? NO
Gene related studies (count: 1)
Reference Tested Markers Statistical Values/Author Comments Result Category Comment on Study
Kerner, B.,2009 SNP: rs6882516 Only a small number of families had been informative for those SNPs in the individual data sets, therefore the analysis of all families combined increased the evidence for those loci. Positive Comment on Study
Gene functional annotation
Gene related GO terms (count: 13)

GO terms by PBA (count: 1)

GO terms by database search (count: 12)

Gene related KEGG pathways (count: 0)

Gene related BioCarta pathways (count: 0)

Gene related interactors from protein-protein interactions data in HPRD (count: 3)

Related other genetic factors
Gene related SNPs (count: 1)

Literature-origin SNPs (count: 1)

LD-proxies (count: 0)

Gene related CNVs (count: 0)

Gene related other variants (count: 0)

Gene related regions (count: 5)

Overlap with schizophrenia (SZ) and major depressive disorder (MDD)
Gene relationship with SZ

Gene relationship with MDD

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Region: chr5:157743695..157760709 View in gBrowse
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