BDgene

Gene Report

Basic Info
Approved Symbol FKBP5
Symbol Alias FKBP51, FKBP54, PPIase, P54, Ptg-10
Approved Name FK506 binding protein 5
Previous Name FK506-binding protein 5
Location 6p21.31
Position chr6:35573585-35728583, -1
External Links HGNC: 3721
Entrez Gene: 2289
Ensembl: ENSG00000096060
UCSC: uc003okx.2
No. of Studies 5 (Positive: 1; Negative: 4; trend: 0)
Overlap with SZ? YES
Overlap with MDD? YES
Gene related studies (count: 5)
Reference Tested Markers Statistical Values/Author Comments Result Category Comment on Study
Willour, V. L.,2009 SNP: rs1043805, rs1360780, rs3798346, rs3800373, rs4713902, rs6912833, rs7757037, rs9296158, rs9380525 In conclusion, common variants of FKBP5 were associated with bipolar disorder and with a feature of illness, number of depressive episodes, implicated in a prior study of depression. Positive Comment on Study
Szczepankiewicz A., 2014 SNP: rs1360780, rs755658, rs9470080, rs4713916, rs7748266, rs9296158, rs9394309, rs3800373
Haplotype: rs1360780 - rs755658 - rs9470080 - rs7748266 - rs9296158 - rs9394309 - rs3800373(A-C-G-C-C-A-C), rs1360780 - rs755658 - rs9470080 - rs7748266 - rs9296158 - rs9394309 - rs3800373(C-C-A-T-T-G-T), rs1360780 - rs755658 - rs9470080 - rs7748266 - rs9296158 - rs9394309 - rs3800373(C-T-A-C-T-G-T), rs1360780 - rs755658 - rs9470080 - rs7748266 - rs9296158 - rs9394309 - rs3800373(A-C-G-C-C-G-T), rs1360780 - rs755658 - rs9470080 - rs7748266 - rs9296158 - rs9394309 - rs3800373(C-C-A-C-T-A-T), rs1360780 - rs755658 - rs9470080 - rs7748266 - rs9296158 - rs9394309 - rs3800373(C-C-A-C-T-G-T), rs1360780 - rs755658 - rs9470080 - rs7748266 - rs9296158 - rs9394309 - rs3800373(A-C-A-T-T-G-T)
Our main finding is an association of FKBP5 polymorphisms (rs1360780, rs9470080, rs4713916, rs9296158 and rs9394309) with major depression but nor with bipolar disorder. Negative Comment on Study
Ceulemans, S.,2011 SNP: rs13192954, rs1334894, rs1360780, rs17542466, rs17614642, rs2143404, rs2294807, rs3777747, rs3798346, rs3800374, rs4713899, rs4713902, rs6912833, rs737054, rs755658, rs7757037, rs9296157, rs9296158, rs9366890, rs9380524, rs9470080, rs992105 No significant associations were detected in BD patients. Negative Comment on Study
Fallin, M. D.,2005 5 SNP typed, Median D'=1, Median r<sup>2</sup> =0.58, 1 LD blocks, 0.34 block coverage, all SNP or haplotype P-value > 0.05 in BP and SZ/SZA... This gene is not suggestive to BP. Negative Comment on Study
Gawlik, M., 2006 SNP: rs1360780, rs3800373, rs4713916
Haplotype: rs4713916 - rs1360780 - rs3800373(G-C-T), rs4713916 - rs1360780 - rs3800373(A-T-G), rs4713916 - rs1360780 - rs3800373(A-C-T), rs4713916 - rs1360780 - rs3800373(G-T-G), rs4713916 - rs1360780 - rs3800373(A-T-T), rs4713916 - rs1360780 - rs3800373(G-T-T), rs4713916 - rs1360780 - rs3800373(G-C-G), rs4713916 - rs1360780 - rs3800373(A-C-G)
Our data do not support a significant genetic contribution of FKBP5 polymorphisms and haplotypes to affective psychosis, and the findings are inconclusive regarding their contribution to disease-related traits. Negative Comment on Study
Gene functional annotation
Gene related GO terms (count: 11)

GO terms by PBA (count: 1)

GO terms by database search (count: 10)


Gene related KEGG pathways (count: 0)

Gene related BioCarta pathways (count: 0)

Gene related interactors from protein-protein interactions data in HPRD (count: 5)

Related other genetic factors
Gene related SNPs (count: 53)

Literature-origin SNPs (count: 28)

LD-proxies (count: 25)


Gene related CNVs (count: 0)

Gene related other variants (count: 0)

Gene related regions (count: 3)

Overlap with schizophrenia (SZ) and major depressive disorder (MDD)
Gene relationship with SZ

Overlap with SZ from cross-disorder studies (count: 1)

Overlap with SZ from candidate gene intersection analysis (count: 3)


Gene relationship with MDD

Overlap with MDD from cross-disorder studies (count: 1)

Overlap with MDD from candidate gene intersection analysis (count: 1)


View in gBrowse

Region: chr6:35573585..35728583 View in gBrowse
View in gBrowse