Gene Report

Basic Info
Approved Symbol ABCG1
Symbol Alias ABC8
Approved Name ATP-binding cassette, sub-family G (WHITE), member 1
Name Alias ATP-binding cassette transporter 8
Location 21q22.3
Position chr21:42199689-42297244, 1
External Links HGNC: 73
Entrez Gene: 9619
Ensembl: ENSG00000160179
UCSC: uc002zaq.3
No. of Studies 1 (Positive: 0; Negative: 1; trend: 0)
Overlap with SZ? NO
Overlap with MDD? NO
Gene related studies (count: 1)
Reference Tested Markers Statistical Values/Author Comments Result Category Comment on Study
Kirov, G.,2001 SNP: rs1044317
Other variant: ABCG1_1248+14insC, ABCG1_1249-64G>T, ABCG1_274+11C>T, ABCG1_-533A>G, ABCG1_576+139A>G, ABCG1_723-20C>T, ABCG1_-768G>A, ABCG1_A2424G, ABCG1_I6 61VNTR, ABCG1_UTR_poly(T), ABCG1_D21S1225
No alleles or haplotypes were significantly preferentially transmitted from parents to affected offspring. Negative Comment on Study
Gene functional annotation
Gene related GO terms (count: 49)

GO terms by PBA (count: 2)

GO terms by database search (count: 47)

Gene related KEGG pathways (count: 1)

KEGG pathways by PBA (count: 1)

KEGG pathways by database search (count: 0)

Gene related BioCarta pathways (count: 0)

Gene related interactors from protein-protein interactions data in HPRD (count: 1)

Related other genetic factors
Gene related SNPs (count: 14)

Literature-origin SNPs (count: 5)

LD-proxies (count: 9)

Gene related CNVs (count: 0)

Gene related other variants (count: 11)

Gene related regions (count: 3)

Overlap with schizophrenia (SZ) and major depressive disorder (MDD)
Gene relationship with SZ

Gene relationship with MDD

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Region: chr21:42199689..42297244 View in gBrowse
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