Gene Report

Basic Info
Approved Symbol PSPC1
Symbol Alias PSP1, FLJ10955
Approved Name paraspeckle component 1
Location 13q11
Position chr13:19674752-19783019, -1
External Links HGNC: 20320
Entrez Gene: 55269
Ensembl: ENSG00000121390
UCSC: uc021rgx.1
No. of Studies 1 (Positive: 0; Negative: 1; trend: 0)
Overlap with SZ? NO
Overlap with MDD? NO
Gene related studies (count: 1)
Reference Tested Markers Statistical Values/Author Comments Result Category Comment on Study
Ross, K. A.,2011 SNP: rs9551988
Haplotype: rs10502407 - rs9551988(), rs12227938 - rs9551988(), rs2122231 - rs9551988(), rs4850057 - rs9551988(), rs9551988 - (SNP A-1797773)(), rs12070036 - rs9551988()
No significant association of this gene was observed in BD. Negative Comment on Study
Gene functional annotation
Gene related GO terms (count: 14)

GO terms by PBA (count: 0)

GO terms by database search (count: 14)

Gene related KEGG pathways (count: 0)

Gene related BioCarta pathways (count: 0)

Gene related interactors from protein-protein interactions data in HPRD (count: 3)

Related other genetic factors
Gene related SNPs (count: 1)

Literature-origin SNPs (count: 1)

LD-proxies (count: 0)

Gene related CNVs (count: 0)

Gene related other variants (count: 0)

Gene related regions (count: 4)

Overlap with schizophrenia (SZ) and major depressive disorder (MDD)
Gene relationship with SZ

Gene relationship with MDD

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Region: chr13:19674752..19783019 View in gBrowse
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