Gene Report

Basic Info
Approved Symbol HOXA3
Previous Symbol HOX1E, HOX1
Approved Name homeobox A3
Previous Name homeo box A3
Location 7p15.2
Position chr7:27106184-27152581, -1
External Links HGNC: 5104
Entrez Gene: 3200
Ensembl: ENSG00000105997
UCSC: uc011jzl.2
No. of Studies 1 (Positive: 1; Negative: 0; trend: 0)
Overlap with SZ? YES
Overlap with MDD? NO
Gene related studies (count: 1)
Reference Tested Markers Statistical Values/Author Comments Result Category Comment on Study
Moskvina, V.,2009 In BP:Smallest P-value per gene=0.00034, Product of P truncation <=0.01=0.00034, Product of P truncation <=0.001=0.00034. It showed evidence for association with BD. Positive Comment on Study
Gene functional annotation
Gene related GO terms (count: 19)

GO terms by PBA (count: 2)

GO terms by database search (count: 17)

Gene related KEGG pathways (count: 0)

Gene related BioCarta pathways (count: 0)

Gene related interactors from protein-protein interactions data in HPRD (count: 1)

Related other genetic factors
Gene related SNPs (count: 0)

Gene related CNVs (count: 0)

Gene related other variants (count: 0)

Gene related regions (count: 2)

Overlap with schizophrenia (SZ) and major depressive disorder (MDD)
Gene relationship with SZ

Overlap with SZ from cross-disorder studies (count: 1)

Overlap with SZ from candidate gene intersection analysis (count: 0)

Gene relationship with MDD

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Region: chr7:27106184..27152581 View in gBrowse
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