Region Report

Basic Info

Region Name	Chr 3
Chromosome Position	chr3:0-198295559
No. of Studies (Positive/Negative/Trend)	2(0/2/0)

Region related studies (count: 2)

Reference	Markers	Statistical Values	Author Comments	Result Category
Badner, J. A.,2002		Meta analysis: Location: 209, Single Analysis MSP = 0.02, Be...... Meta analysis: Location: 209, Single Analysis MSP = 0.02, Best Analysis MSP = 0.05 More...	No significant linkage was found in this region. No significant linkage was found in this region.	Negative
Murphy, V. E.,2000	D3S1581	Linkage analysis: broad model, NPL = -0.895, P-value = 0.83;...... Linkage analysis: broad model, NPL = -0.895, P-value = 0.83; narrow model, NPL = -0.159, P-value = 0.61 More...	No significant linkage was found in this region. No significant linkage was found in this region.	Negative

Region related genes (count: 92)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
MUC4	mucin 4, cell surface associated	3q29	2(0/2/0)
CDV3	CDV3 homolog (mouse)	3q22.1	1(0/0/1)
SNX4	sorting nexin 4	3q21.2	1(0/0/1)
TRH	thyrotropin-releasing hormone	3q13.3-q21	1(1/0/0)
LAMP3	lysosomal-associated membrane protein 3	3q26.3-q27	1(1/0/0)
ITGA9	integrin, alpha 9	3p21.3	1(1/0/0)
TRAIP	TRAF interacting protein	3p21.31	1(0/0/1)
VEZF1P1	vascular endothelial zinc finger 1 pseudogene 1	3q29	1(0/1/0)
OPA1	optic atrophy 1 (autosomal dominant)	3q29	1(0/1/0)
TFRC	transferrin receptor	3q29	1(0/1/0)
DLG1	discs, large homolog 1 (Drosophila)	3q29	2(1/1/0)
LMOD3	leiomodin 3 (fetal)	3p14.1	1(0/1/0)
TM4SF19	transmembrane 4 L six family member 19	3q29	1(0/1/0)
GNL3	guanine nucleotide binding protein-like 3 (nucleolar)	3p21.1	2(2/0/0)
GABRR3	gamma-aminobutyric acid (GABA) A receptor, rho 3 (gene/pseudogene)	3q11.2	1(1/0/0)
LSG1	large 60S subunit nuclear export GTPase 1	3q29	1(0/1/0)
PROK2	prokineticin 2	3p21.1	1(0/1/0)
SYN2	synapsin II	3p25.2	1(0/1/0)
CMTM8	CKLF-like MARVEL transmembrane domain containing 8	3p22.2	2(1/1/0)
RBMS3	RNA binding motif, single stranded interacting protein 3	3p24-p23	1(0/1/0)
GBE1	glucan (1,4-alpha-), branching enzyme 1	3p12.2	1(0/1/0)
CRBN	cereblon	3p26.3	1(1/0/0)
NCBP2	nuclear cap binding protein subunit 2, 20kDa	3q29	1(0/1/0)
ROBO2	roundabout, axon guidance receptor, homolog 2 (Drosophila)	3p12.3	1(0/1/0)
HTR1F	5-hydroxytryptamine (serotonin) receptor 1F, G protein-coupled	3p12	1(1/0/0)
FGF12	fibroblast growth factor 12	3q28	1(0/1/0)
CHL1	cell adhesion molecule L1-like	3p26	1(1/0/0)
XXYLT1	xyloside xylosyltransferase 1	3q29	2(0/2/0)
CACNA1D	calcium channel, voltage-dependent, L type, alpha 1D subunit	3p14.3	1(1/0/0)
CCK	cholecystokinin	3p22.1	2(0/1/1)
ITIH1	inter-alpha-trypsin inhibitor heavy chain 1	3p21.1	1(1/0/0)
GSK3B	glycogen synthase kinase 3 beta	3q13.3	8(0/8/0)
DRD3	dopamine receptor D3	3q13.3	19(4/15/0)
FYTTD1	forty-two-three domain containing 1	3q29	1(0/1/0)
NEK4	NIMA-related kinase 4	3p21.1	1(1/0/0)
PPP1R2	protein phosphatase 1, regulatory (inhibitor) subunit 2	3q29	1(0/1/0)
PLCL2	phospholipase C-like 2	3p24.3	1(0/1/0)
ITIH3	inter-alpha-trypsin inhibitor heavy chain 3	3p21.1	3(3/0/0)
CNTN4	contactin 4	3p26.3	1(1/0/0)
GRM2	glutamate receptor, metabotropic 2	3p21.2	1(0/1/0)
UBE2E2	ubiquitin-conjugating enzyme E2E 2	3p24.2	1(0/1/0)
BDH1	3-hydroxybutyrate dehydrogenase, type 1	3q29	2(1/1/0)
LMLN	leishmanolysin-like (metallopeptidase M8 family)	3q29	1(0/1/0)
SST	somatostatin	3q28	1(0/1/0)
ACAP2	ArfGAP with coiled-coil, ankyrin repeat and PH domains 2	3q29	1(0/1/0)
ATP1B3	ATPase, Na+/K+ transporting, beta 3 polypeptide	3q23	1(0/1/0)
ATP13A4	ATPase type 13A4	3q29	1(0/1/0)
RPSAP30	ribosomal protein SA pseudogene 30	3q29	1(0/1/0)
OXTR	oxytocin receptor	3p25	1(0/1/0)
WDR53	WD repeat domain 53	3q29	1(0/1/0)
LOC727978	mucin-5AC-like	3q29	1(0/1/0)
DPPA2P3	developmental pluripotency associated 2 pseudogene 3	3q29	1(0/1/0)
LOC220729	succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene	3q29	1(1/0/0)
ZXDC	ZXD family zinc finger C	3q21.3	1(0/1/0)
RAD18	RAD18 E3 ubiquitin protein ligase	3p25.3	1(0/0/1)
KCNMB2	potassium channel subfamily M regulatory beta subunit 2	3q26.32	1(1/0/0)
ZNF385D	zinc finger protein 385D	3p24.3	1(0/1/0)
FAM43A	family with sequence similarity 43, member A	3q29	1(0/1/0)
CPN2	carboxypeptidase N, polypeptide 2	3q29	1(1/0/0)
CNTN6	contactin 6	3p26.3	1(1/0/0)
MBNL1	muscleblind-like splicing regulator 1	3q25	1(1/0/0)
TRANK1	tetratricopeptide repeat and ankyrin repeat containing 1	3p22.2	5(2/1/2)
MB21D2	Mab-21 domain containing 2	3q28-q29	1(0/1/0)
HES1	hes family bHLH transcription factor 1	3q28-q29	1(0/1/0)
SMCO1	single-pass membrane protein with coiled-coil domains 1	3q29	1(0/1/0)
FBLN2	fibulin 2	3p25-p24	1(0/0/1)
CLDN16	claudin 16	3q28	1(0/1/0)
GRM7	glutamate receptor, metabotropic 7	3p26-p25	3(2/1/0)
AGTR1	angiotensin II receptor, type 1	3q24	1(1/0/0)
ERC2	ELKS/RAB6-interacting/CAST family member 2	3p14.3	1(0/0/1)
PLD1	phospholipase D1, phosphatidylcholine-specific	3q26	1(1/0/0)
APOD	apolipoprotein D	3q29	1(0/1/0)
MED12L	mediator complex subunit 12-like	3q25.1	1(1/0/0)
TCTEX1D2	Tctex1 domain containing 2	3q29	1(0/1/0)
P2RY13	purinergic receptor P2Y, G-protein coupled, 13	3q24	1(1/0/0)
PBRM1	polybromo 1	3p21	5(4/0/1)
LRRC15	leucine rich repeat containing 15	3q29	1(0/1/0)
ZBTB20	zinc finger and BTB domain containing 20	3q13.2	1(0/1/0)
GLT8D1	glycosyltransferase 8 domain containing 1	3p21.1	1(1/0/0)
TNK2	tyrosine kinase, non-receptor, 2	3q29	1(0/1/0)
MAGI1	membrane associated guanylate kinase, WW and PDZ domain containing 1	3p14.1	1(1/0/0)
UBXN7	UBX domain protein 7	3q29	1(0/1/0)
TMEM108	transmembrane protein 108	3q22.1	1(1/0/0)
POMGNT2	protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-)	3p22.1	1(0/0/1)
EGFEM1P	EGF-like and EMI domain containing 1, pseudogene	3q26.2	1(0/1/0)
ZDHHC19	zinc finger, DHHC-type containing 19	3q29	1(0/1/0)
GPR87	G protein-coupled receptor 87	3q24	1(1/0/0)
GNAI2	guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2	3p21.31	1(0/1/0)
CADM2	cell adhesion molecule 2	3p12.2	1(0/1/0)
CCDC50	coiled-coil domain containing 50	3q28	2(1/1/0)
DOCK3	dedicator of cytokinesis 3	3p21	1(0/1/0)
VEPH1	ventricular zone expressed PH domain-containing 1	3q24-q25	1(1/0/0)

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Region: chr3:0..198295559 View in gBrowse