Gene Report

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Basic Info

Approved Symbol	LOC220729
Approved Name	succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene
Location	3q29
Position	chr3:197614027-197627881, -1
External Links	Entrez Gene: 220729
No. of Studies	1 (Positive: 1; Negative: 0; trend: 0)
Overlap with SZ?	NO
Overlap with MDD?	NO

Gene related studies (count: 1)

Reference	Tested Markers	Statistical Values/Author Comments	Result Category	Comment on Study
Noor A., 2014		Selected stringent CNV related to this gene is validated by qPCR from BD case data.	Positive	Comment on Study

Gene functional annotation

Gene related GO terms (count: 0)

Gene related KEGG pathways (count: 0)

Gene related BioCarta pathways (count: 0)

Gene related interactors from protein-protein interactions data in HPRD (count: 0)

Related other genetic factors

Gene related SNPs (count: 0)

Gene related CNVs (count: 2)

ID	Location	Size	Band	Type	Inheritance
CNV_Abdul Noor[2014]_5	chr3:198394479-198832486 (NCBI Build 36/hg18)	438000	3q29	duplication
CNV_Abdul Noor[2014]_26	chr3:198394479-198828573 (NCBI Build 36/hg18)	434000	3q29	duplication

Gene related other variants (count: 0)

Gene related regions (count: 2)

Region Name	Position	No. of Studies (Positive/Negative/Trend)
Chr 3	chr3:0-198295559	2 (0/2/0)
3q29	chr3:192600000-198295559	2 (1/0/1)

Overlap with schizophrenia (SZ) and major depressive disorder (MDD)

Gene relationship with SZ

Gene relationship with MDD

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Region: chr3:197614027..197627881 View in gBrowse