BDgene

Gene Report

Basic Info
Approved Symbol SYN2
Symbol Alias SYNII, SYNIIa, SYNIIb
Approved Name synapsin II
Location 3p25.2
Position chr3:12004402-12191400, 1
External Links HGNC: 11495
Entrez Gene: 6854
Ensembl: ENSG00000157152
UCSC: uc032rek.1
No. of Studies 1 (Positive: 0; Negative: 1; trend: 0)
Overlap with SZ? YES
Overlap with MDD? YES
Gene related studies (count: 1)
Reference Tested Markers Statistical Values/Author Comments Result Category Comment on Study
Wang, Y.,2009 SNP: rs308963, rs795009 The frequencies of the alleles or genotypes did not differ significantly between the case group and the control group.No association was found in this study. Negative Comment on Study
Gene functional annotation
Gene related GO terms (count: 8)

GO terms by PBA (count: 2)

GO terms by database search (count: 6)


Gene related KEGG pathways (count: 0)

Gene related BioCarta pathways (count: 0)

Gene related interactors from protein-protein interactions data in HPRD (count: 4)

Related other genetic factors
Gene related SNPs (count: 33)

Literature-origin SNPs (count: 2)

LD-proxies (count: 31)


Gene related CNVs (count: 0)

Gene related other variants (count: 0)

Gene related regions (count: 3)

Overlap with schizophrenia (SZ) and major depressive disorder (MDD)
Gene relationship with SZ

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with SZ from candidate gene intersection analysis (count: 5)


Gene relationship with MDD

Overlap with MDD from cross-disorder studies (count: 0)

Overlap with MDD from candidate gene intersection analysis (count: 3)


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Region: chr3:12004402..12191400 View in gBrowse
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