Gene Report

Basic Info
Approved Symbol CHL1
Symbol Alias CALL, L1CAM2, FLJ44930, MGC132578
Approved Name cell adhesion molecule L1-like
Previous Name cell adhesion molecule with homology to L1CAM (close homologue of L1), "cell adhesion molecule with homology to L1CAM (close homolog of L1)"
Name Alias neural cell adhesion molecule, "close homolog of L1"
Location 3p26
Position chr3:196596-409417, 1
External Links HGNC: 1939
Entrez Gene: 10752
Ensembl: ENSG00000134121
UCSC: uc003bot.3
No. of Studies 1 (Positive: 1; Negative: 0; trend: 0)
Overlap with SZ? YES
Overlap with MDD? NO
Gene related studies (count: 1)
Reference Tested Markers Statistical Values/Author Comments Result Category Comment on Study
Noor A., 2014 Selected stringent CNV related to this gene is validated by qPCR from BD case data. Positive Comment on Study
Gene functional annotation
Gene related GO terms (count: 16)

GO terms by PBA (count: 4)

GO terms by database search (count: 12)

Gene related KEGG pathways (count: 0)

Gene related BioCarta pathways (count: 0)

Gene related interactors from protein-protein interactions data in HPRD (count: 0)

Related other genetic factors
Gene related SNPs (count: 0)

Gene related CNVs (count: 1)

Gene related other variants (count: 0)

Gene related regions (count: 2)

Overlap with schizophrenia (SZ) and major depressive disorder (MDD)
Gene relationship with SZ

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with SZ from candidate gene intersection analysis (count: 3)

Gene relationship with MDD

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Region: chr3:196596..409417 View in gBrowse
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