BDgene

GO Report

Basic Info
ID GO:0007411
Name axon guidance
Type biological process
No. of Genes in BDgene  60
Source Pathway by PBA

PBA Result
Pathway Name in Paper Source Reference Data Set Tool Result Parameters Result Link
GO: 0007411: axon guidance PBA paper Askland, K.,2009 NIMH Fisher's exact test Results given for gene sets with P < 0.01 from the NIMH PBA-BP data

GO related genes in BDgene (count: 60)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend) Evidence[PMID]
DLG1 discs, large homolog 1 (Drosophila) 3q29 2(1/1/0) TAS
GRIN1 glutamate receptor, ionotropic, N-methyl D-aspartate 1 9q34.3 3(2/1/0) TAS
NRXN1 neurexin 1 2p16.3 1(1/0/0) TAS[1621094]
CAP2 CAP, adenylate cyclase-associated protein, 2 (yeast) 6p22.3 1(0/1/0) TAS
NCK2 NCK adaptor protein 2 2q12 1(1/0/0) TAS
MYH14 myosin, heavy chain 14, non-muscle 19q13.33 1(0/1/0) TAS
BDNF brain-derived neurotrophic factor 11p14.1 37(24/12/1) IEA
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric 18p11.31 1(1/0/0) TAS
EGFR epidermal growth factor receptor 7p12 1(0/0/1) TAS
RAC1 ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1) 7p22 1(1/0/0) TAS
CACNB3 calcium channel, voltage-dependent, beta 3 subunit 12q13 1(0/0/1) TAS
LGI1 leucine-rich, glioma inactivated 1 10q24 1(0/1/0) IMP[20463223]
FYN FYN proto-oncogene, Src family tyrosine kinase 6q21 1(1/0/0) TAS
RELN reelin 7q22 3(1/2/0) ISS
PTPRO protein tyrosine phosphatase, receptor type, O 12p13-p12 1(0/1/0) ISS
TENM2 teneurin transmembrane protein 2 5q35 1(0/0/1) IDA[21724987]
KCNQ2 potassium channel, voltage gated KQT-like subfamily Q, member 2 20q13.33 1(1/0/0) TAS
PLXNA2 plexin A2 1q32.2 1(1/0/0) TAS
DCC DCC netrin 1 receptor 18q21.1 2(1/1/0) TAS
NRXN3 neurexin 3 14q31 2(2/0/0) TAS[1621094]
ANK3 ankyrin 3, node of Ranvier (ankyrin G) 10q21 17(13/3/1) IEA
TRIO trio Rho guanine nucleotide exchange factor 5p14-p15.1 1(0/1/0) TAS
DLG3 discs, large homolog 3 (Drosophila) Xq13.1 1(0/1/0) TAS
GFRA1 GDNF family receptor alpha 1 10q25-q26 2(1/1/0) TAS
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A 5p15.2 1(1/0/0) TAS
ANK2 ankyrin 2, neuronal 4q25-q26 1(0/1/0) TAS
GSK3B glycogen synthase kinase 3 beta 3q13.3 8(0/8/0) TAS
CACNA1C calcium channel, voltage-dependent, L type, alpha 1C subunit 12p13.3 20(17/3/0) TAS
OTX2 orthodenticle homeobox 2 14q22.3 1(1/0/0) IDA[16267555]
GRIN2B glutamate receptor, ionotropic, N-methyl D-aspartate 2B 12p13.1 8(4/4/0) TAS
MMP9 matrix metallopeptidase 9 20q13.12 1(1/0/0) TAS
PLCG1 phospholipase C, gamma 1 20q12-q13.1 1(0/1/0) TAS
NCAN neurocan 19p12 1(1/0/0) TAS
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 14q32.33 1(1/0/0) TAS
NCAM1 neural cell adhesion molecule 1 11q23.2 3(2/1/0) TAS
CNTN6 contactin 6 3p26.3 1(1/0/0) TAS
EPHA5 EPH receptor A5 4q13.1 1(1/0/0) ISS; TAS
CACNB2 calcium channel, voltage-dependent, beta 2 subunit 10p12 3(2/1/0) TAS
TNR tenascin R 1q24 2(0/2/0) NAS[8940128]
CACNA1D calcium channel, voltage-dependent, L type, alpha 1D subunit 3p14.3 1(1/0/0) TAS
ITGA9 integrin, alpha 9 3p21.3 1(1/0/0) TAS
DPYSL2 dihydropyrimidinase-like 2 8p22-p21 2(1/0/1) TAS
MYL12B myosin, light chain 12B, regulatory 18p11.31 1(1/0/0) TAS
FEZ1 fasciculation and elongation protein zeta 1 (zygin I) 11q24.2 2(0/2/0) TAS[9096408]
GLI2 GLI family zinc finger 2 2q14 1(0/1/0) ISS
CACNA1S calcium channel, voltage-dependent, L type, alpha 1S subunit 1q32 1(0/1/0) TAS
ST8SIA2 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 15q26 2(2/0/0) TAS
GDNF glial cell derived neurotrophic factor 5p13.1-p12 1(1/0/0) TAS
LAMB1 laminin, beta 1 7q22 1(0/0/1) TAS
KIF5B kinesin family member 5B 10p11.22 1(0/0/1) IBA
GLI3 GLI family zinc finger 3 7p13 1(1/0/0) IEA
CNTN4 contactin 4 3p26.3 1(1/0/0) TAS[15106122]
RGMA repulsive guidance molecule family member a 15q26.1 1(1/0/0) TAS
CHL1 cell adhesion molecule L1-like 3p26 1(1/0/0) TAS
SLIT3 slit homolog 3 (Drosophila) 5q35 1(1/0/0) IDA[11748139]; TAS
NUMB numb homolog (Drosophila) 14q24.3 1(0/0/1) TAS
KCNQ3 potassium channel, voltage gated KQT-like subfamily Q, member 3 8q24 4(3/0/1) TAS
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) 3p12.3 1(0/1/0) ISS; TAS
CSNK2A1 casein kinase 2, alpha 1 polypeptide 20p13 2(0/2/0) TAS
CREB1 cAMP responsive element binding protein 1 2q34 2(1/1/0) TAS