Gene Report

Basic Info
Approved Symbol NCAN
Previous Symbol CSPG3
Approved Name neurocan
Previous Name chondroitin sulfate proteoglycan 3
Name Alias neurocan proteoglycan
Location 19p12
Position chr19:19211973-19252233, 1
External Links HGNC: 2465
Entrez Gene: 1463
Ensembl: ENSG00000130287
UCSC: uc002nlz.3
No. of Studies 1 (Positive: 1; Negative: 0; trend: 0)
Overlap with SZ? NO
Overlap with MDD? NO
Gene related studies (count: 1)
Reference Tested Markers Statistical Values/Author Comments Result Category Comment on Study
Cichon, S.,2011 SNP: rs1064395 In summary, the present study has identified a susceptibility factor , NCAN for BD. Positive Comment on Study
Gene functional annotation
Gene related GO terms (count: 22)

GO terms by PBA (count: 5)

GO terms by database search (count: 17)

Gene related KEGG pathways (count: 0)

Gene related BioCarta pathways (count: 0)

Gene related interactors from protein-protein interactions data in HPRD (count: 5)

Related other genetic factors
Gene related SNPs (count: 6)

Literature-origin SNPs (count: 1)

LD-proxies (count: 5)

Gene related CNVs (count: 0)

Gene related other variants (count: 0)

Gene related regions (count: 3)

Overlap with schizophrenia (SZ) and major depressive disorder (MDD)
Gene relationship with SZ

Gene relationship with MDD

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Region: chr19:19211973..19252233 View in gBrowse
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