GO Report

Basic Info

ID	GO:0005509
Name	calcium ion binding
Type	molecular function
No. of Genes in BDgene	50
Source	Pathway by PBA

PBA Result

Pathway Name in Paper	Source	Reference	Data Set	Tool	Result Parameters
GO: 0005509: Ca2+ ion binding	PBA paper	Askland, K.,2009	WTCCC Bayesian genotypic	Fisher's exact test	P < 0.05 from the WTCCC PBAs
GO: 0005509: Ca2+ ion binding	PBA paper	Askland, K.,2009	NIMH	Fisher's exact test	Results given for gene sets with P < 0.05 from the NIMH PBA; Molecular function
GO: 0005509: Ca2+ ion binding	PBA paper	Askland, K.,2009	WTCCC Frequentist genotypic	Fisher's exact test	P < 0.05 from the WTCCC PBAs

GO related genes in BDgene (count: 50)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)	Evidence[PMID]
PNLIPRP1	pancreatic lipase-related protein 1	10q26.12	1(1/0/0)	ISS
PON1	paraoxonase 1	7q21.3	2(2/0/0)	IDA[15098021]
MMP3	matrix metallopeptidase 3	11q22.3	1(0/1/0)	IEA
TLL2	tolloid-like 2	10q23-q24	1(1/0/0)	IEA
PLCG1	phospholipase C, gamma 1	20q12-q13.1	1(0/1/0)	IEA
CACNA1B	calcium channel, voltage-dependent, N type, alpha 1B subunit	9q34	1(1/0/0)	IEA
SVEP1	sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1	9q31-q32	1(1/0/0)	IEA
NOTCH3	notch 3	19p13.2-p13.1	1(0/1/0)	IEA
MYL12A	myosin, light chain 12A, regulatory, non-sarcomeric	18p11.31	1(1/0/0)	IEA
CDH13	cadherin 13	16q23.3	3(2/1/0)	IEA
ITIH1	inter-alpha-trypsin inhibitor heavy chain 1	3p21.1	1(1/0/0)	TAS[2446322]
SRR	serine racemase	17p13	1(0/1/0)	ISS
CDH15	cadherin 15, type 1, M-cadherin (myotubule)	16q24.3	1(1/0/0)	IEA
PCDH15	protocadherin-related 15	10q21.1	4(2/1/1)	IEA
MYL12B	myosin, light chain 12B, regulatory	18p11.31	1(1/0/0)	IEA
CDH7	cadherin 7, type 2	18q22.1	1(0/0/1)	IEA
GRIN1	glutamate receptor, ionotropic, N-methyl D-aspartate 1	9q34.3	3(2/1/0)	ISS
SLIT3	slit homolog 3 (Drosophila)	5q35	1(1/0/0)	NAS[9813312]
FBN1	fibrillin 1	15q21.1	2(0/2/0)	IDA[7691719]
NCALD	neurocalcin delta	8q22.3	1(0/1/0)	IEA
NRXN1	neurexin 1	2p16.3	1(1/0/0)	ISS
OC90	otoconin 90	8q24.22	1(0/1/0)	IEA
S100B	S100 calcium binding protein B	21q22.3	2(1/1/0)	NAS[9519411]
PLA2G1B	phospholipase A2, group IB (pancreas)	12q24.31	4(1/3/0)	IDA[7060561]
KCNIP4	Kv channel interacting protein 4	4p15.32	1(0/1/0)	IDA[11847232]
GCH1	GTP cyclohydrolase 1	14q22.1-q22.2	2(1/1/0)	IEA
NOTCH4	notch 4	6p21.3	2(0/2/0)	TAS[11823422]
CDHR3	cadherin-related family member 3	7q22.2	1(0/1/0)	IEA
DST	dystonin	6p12.1	1(0/0/1)	IEA
GRM7	glutamate receptor, metabotropic 7	3p26-p25	3(2/1/0)	IDA[18599484]
CAMKK2	calcium/calmodulin-dependent protein kinase kinase 2, beta	12q24.2	2(1/1/0)	IDA[11395482]
FBLN2	fibulin 2	3p25-p24	1(0/0/1)	IEA
ATP2A2	ATPase, Ca++ transporting, cardiac muscle, slow twitch 2	12q24.11	2(0/2/0)	IDA[16402920]
FSTL5	follistatin-like 5	4q32.3	1(0/0/1)	IEA
EPDR1	ependymin related 1	7p14.1	1(1/0/0)	IEA
UMOD	uromodulin	16p12.3	1(0/0/1)	IEA
LRP8	low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	1p32.3	1(1/0/0)	IEA
FSTL4	follistatin-like 4	5q31.1	1(0/0/1)	IEA
HSPA5	heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)	9q33.3	1(0/1/0)	TAS[16130169]
RYR2	ryanodine receptor 2 (cardiac)	1q43	1(1/0/0)	IEA
HSP90B1	heat shock protein 90kDa beta (Grp94), member 1	12q24.2-q24.3	1(1/0/0)	TAS[10497210]
CACNA1E	calcium channel, voltage-dependent, R type, alpha 1E subunit	1q25.3	1(1/0/0)	IEA
DGKB	diacylglycerol kinase, beta 90kDa	7p21.2	1(1/0/0)	IEA
NCAN	neurocan	19p12	1(1/0/0)	IEA
PPP3CB	protein phosphatase 3, catalytic subunit, beta isozyme	10q22.2	2(1/1/0)	IDA[8524402]
PITPNM2	phosphatidylinositol transfer protein, membrane-associated 2	12q24.31	1(0/1/0)	NAS[10022914]
GUCA1A	guanylate cyclase activator 1A (retina)	6p21.1	2(0/1/1)	IEA
CCBE1	collagen and calcium binding EGF domains 1	18q21.32	1(0/1/0)	IEA
ANXA1	annexin A1	9q21.13	1(0/0/1)	IEA
MMP16	matrix metallopeptidase 16 (membrane-inserted)	8q21	1(0/1/0)	IEA