BDgene

GO Report

Basic Info
ID GO:0005509
Name calcium ion binding
Type molecular function
No. of Genes in BDgene  50
Source Pathway by PBA

PBA Result
Pathway Name in Paper Source Reference Data Set Tool Result Parameters Result Link
GO: 0005509: Ca2+ ion binding PBA paper Askland, K.,2009 WTCCC Frequentist genotypic Fisher's exact test P < 0.05 from the WTCCC PBAs
GO: 0005509: Ca2+ ion binding PBA paper Askland, K.,2009 WTCCC Bayesian genotypic Fisher's exact test P < 0.05 from the WTCCC PBAs
GO: 0005509: Ca2+ ion binding PBA paper Askland, K.,2009 NIMH Fisher's exact test Results given for gene sets with P < 0.05 from the NIMH PBA; Molecular function

GO related genes in BDgene (count: 50)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend) Evidence[PMID]
PNLIPRP1 pancreatic lipase-related protein 1 10q26.12 1(1/0/0) ISS
PON1 paraoxonase 1 7q21.3 2(2/0/0) IDA[15098021]
MMP3 matrix metallopeptidase 3 11q22.3 1(0/1/0) IEA
TLL2 tolloid-like 2 10q23-q24 1(1/0/0) IEA
PLCG1 phospholipase C, gamma 1 20q12-q13.1 1(0/1/0) IEA
CACNA1B calcium channel, voltage-dependent, N type, alpha 1B subunit 9q34 1(1/0/0) IEA
SVEP1 sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 9q31-q32 1(1/0/0) IEA
NOTCH3 notch 3 19p13.2-p13.1 1(0/1/0) IEA
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric 18p11.31 1(1/0/0) IEA
CDH13 cadherin 13 16q23.3 3(2/1/0) IEA
ITIH1 inter-alpha-trypsin inhibitor heavy chain 1 3p21.1 1(1/0/0) TAS[2446322]
SRR serine racemase 17p13 1(0/1/0) ISS
CDH15 cadherin 15, type 1, M-cadherin (myotubule) 16q24.3 1(1/0/0) IEA
PCDH15 protocadherin-related 15 10q21.1 4(2/1/1) IEA
MYL12B myosin, light chain 12B, regulatory 18p11.31 1(1/0/0) IEA
CDH7 cadherin 7, type 2 18q22.1 1(0/0/1) IEA
GRIN1 glutamate receptor, ionotropic, N-methyl D-aspartate 1 9q34.3 3(2/1/0) ISS
SLIT3 slit homolog 3 (Drosophila) 5q35 1(1/0/0) NAS[9813312]
FBN1 fibrillin 1 15q21.1 2(0/2/0) IDA[7691719]
NCALD neurocalcin delta 8q22.3 1(0/1/0) IEA
NRXN1 neurexin 1 2p16.3 1(1/0/0) ISS
OC90 otoconin 90 8q24.22 1(0/1/0) IEA
S100B S100 calcium binding protein B 21q22.3 2(1/1/0) NAS[9519411]
PLA2G1B phospholipase A2, group IB (pancreas) 12q24.31 4(1/3/0) IDA[7060561]
KCNIP4 Kv channel interacting protein 4 4p15.32 1(0/1/0) IDA[11847232]
GCH1 GTP cyclohydrolase 1 14q22.1-q22.2 2(1/1/0) IEA
NOTCH4 notch 4 6p21.3 2(0/2/0) TAS[11823422]
CDHR3 cadherin-related family member 3 7q22.2 1(0/1/0) IEA
DST dystonin 6p12.1 1(0/0/1) IEA
GRM7 glutamate receptor, metabotropic 7 3p26-p25 3(2/1/0) IDA[18599484]
CAMKK2 calcium/calmodulin-dependent protein kinase kinase 2, beta 12q24.2 2(1/1/0) IDA[11395482]
FBLN2 fibulin 2 3p25-p24 1(0/0/1) IEA
ATP2A2 ATPase, Ca++ transporting, cardiac muscle, slow twitch 2 12q24.11 2(0/2/0) IDA[16402920]
FSTL5 follistatin-like 5 4q32.3 1(0/0/1) IEA
EPDR1 ependymin related 1 7p14.1 1(1/0/0) IEA
UMOD uromodulin 16p12.3 1(0/0/1) IEA
LRP8 low density lipoprotein receptor-related protein 8, apolipoprotein e receptor 1p32.3 1(1/0/0) IEA
FSTL4 follistatin-like 4 5q31.1 1(0/0/1) IEA
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 9q33.3 1(0/1/0) TAS[16130169]
RYR2 ryanodine receptor 2 (cardiac) 1q43 1(1/0/0) IEA
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 12q24.2-q24.3 1(1/0/0) TAS[10497210]
CACNA1E calcium channel, voltage-dependent, R type, alpha 1E subunit 1q25.3 1(1/0/0) IEA
DGKB diacylglycerol kinase, beta 90kDa 7p21.2 1(1/0/0) IEA
NCAN neurocan 19p12 1(1/0/0) IEA
PPP3CB protein phosphatase 3, catalytic subunit, beta isozyme 10q22.2 2(1/1/0) IDA[8524402]
PITPNM2 phosphatidylinositol transfer protein, membrane-associated 2 12q24.31 1(0/1/0) NAS[10022914]
GUCA1A guanylate cyclase activator 1A (retina) 6p21.1 2(0/1/1) IEA
CCBE1 collagen and calcium binding EGF domains 1 18q21.32 1(0/1/0) IEA
ANXA1 annexin A1 9q21.13 1(0/0/1) IEA
MMP16 matrix metallopeptidase 16 (membrane-inserted) 8q21 1(0/1/0) IEA