SNP 
Related Gene(s) 
Allele Change 
Risk Allele 
Statistical Values 
Author Comments 
Result Category 
rs13414801 
BRE


C 
Pvalue = 0.001 when genotyped individually in the test sample (NIMH); Pvalue = 0.913 when individually genotyped in the Replication sample (German); Pvalue = 0.056 in the combined dataset. OR (95% CI)=NS


Negative

rs13218303 
GRM1


G 
Pvalue = 0.082 when genotyped individually in the test sample (NIMH)


Negative

rs12608087 
LAMA3


C 
Pvalue = 0.011 when genotyped individually in the test sample (NIMH); Pvalue = 0.439 when individually genotyped in the Replication sample (German); Pvalue = 0.03 in the combined dataset. OR (95% CI)=1.25 (1.021.52)


Negative

rs12410676 
VAV3


G 
Pvalue = 0.061 when genotyped individually in the test sample (NIMH); Pvalue = 0.024 when individually genotyped in the Replication sample (German); Pvalue = 0.004 in the combined dataset. OR (95% CI)=1.28 (1.091.51)


Negative

rs1818290 
RBFOX1


G 
Pvalue = 0.657 when genotyped individually in the test sample (NIMH)


Negative

rs17477151 
LRRC4C


G 
Pvalue = 0.027 when genotyped individually in the test sample (NIMH); Pvalue = 0.285 when individually genotyped in the Replication sample (German); Pvalue = 0.03 in the combined dataset. OR (95% CI)=1.26 (1.031.55)


Negative

rs17350383 
HDAC9


T 
Pvalue = 0.218 when genotyped individually in the test sample (NIMH)


Negative

rs17125698 
FOXN3


C 
Pvalue = 0.028 when genotyped individually in the test sample (NIMH); Pvalue = 0.049 when individually genotyped in the Replication sample (German); Pvalue = 0.003 in the combined dataset. OR (95% CI)=1.26 (1.081.47)


Negative

rs10500336 
RBFOX1


G 
Pvalue = 0.018 when genotyped individually in the test sample (NIMH); Pvalue = 0.38 when individually genotyped in the Replication sample (German); Pvalue = 0.022 in the combined dataset. OR (95% CI)=1.20 (1.021.41)


Negative

rs1012053 
DGKH


A 
Pvalue = 0.0002 when genotyped individually in the test sample (NIMH); Pvalue = 1.5E05 when individually genotyped in the Replication sample (German); Pvalue = 1.5E08 in the combined dataset. OR (95% CI)=1.59 (1.351.87)

significant at the P < 0.05 level in both samples. This SNP ......
significant at the P < 0.05 level in both samples. This SNP is significant at the experimentwide P < 0.01 after Bonferroni correction of the combined results for the total number of SNPs studied.
More...

Positive

rs1170191 
DGKH


C 
Pvalue = 0.003 when genotyped individually in the test sample (NIMH); Pvalue = 0.0003 when individually genotyped in the Replication sample (German); Pvalue = 3.7E08 in the combined dataset. OR (95% CI)=1.42 (1.231.65)

significant at the P < 0.05 level in both samples.
significant at the P < 0.05 level in both samples.

Positive

rs1131171 
NCL
SNORD82


G 
Pvalue = 0.048 when genotyped individually in the test sample (NIMH); Pvalue = 0.104 when individually genotyped in the Replication sample (German); Pvalue = 0.013 in the combined dataset. OR (95% CI)=1.20 (1.041.38)


Negative

rs11021955 
GALNT18


C 
Pvalue = 0.003 when genotyped individually in the test sample (NIMH); Pvalue = 0.059 when individually genotyped in the Replication sample (German); Pvalue = 0.001 in the combined dataset. OR (95% CI)=1.33 (1.121.56)


Negative

rs10937823 
SORCS2


C 
Pvalue = 0.001 when genotyped individually in the test sample (NIMH); Pvalue = 0.004 when individually genotyped in the Replication sample (German); Pvalue = 0.000014 in the combined dataset. OR (95% CI)=1.67 (1.322.13)

significant at the P < 0.05 level in both samples.
significant at the P < 0.05 level in both samples.

Trend

rs437179 
NELFE
SKIV2L


G 
Pvalue = 0.018 when genotyped individually in the test sample (NIMH); Pvalue = 0.053 when individually genotyped in the Replication sample (German); Pvalue = 0.003 in the combined dataset. OR (95% CI)=1.21 (1.071.36)


Negative

rs4398100 
PLCG2


C 
Pvalue = 0.069 when genotyped individually in the test sample (NIMH); Pvalue = 0.106 when individually genotyped in the Replication sample (German); Pvalue = 0.014 in the combined dataset. OR (95% CI)=1.20 (1.041.39)


Negative

rs4411993 
SORCS2
MIR4274


C 
Pvalue = 0.003 when genotyped individually in the test sample (NIMH); Pvalue = 0.03 when individually genotyped in the Replication sample (German); Pvalue = 0.0005 in the combined dataset. OR (95% CI)=1.35 (1.141.61)

significant at the P < 0.05 level in both samples.
significant at the P < 0.05 level in both samples.

Negative

rs4813030 
PSMF1


C 
Pvalue = 0.004 when genotyped individually in the test sample (NIMH); Pvalue = 0.545 when individually genotyped in the Replication sample (German); Pvalue = 0.023 in the combined dataset. OR (95% CI)=1.18 (1.031.35)


Negative

rs6501822 
LLGL2


G 
Pvalue = 0.0192 when genotyped individually in the test sample (NIMH)


Negative

rs7204975 
RBFOX1
RNU799P


C 
Pvalue = 0.001 when genotyped individually in the test sample (NIMH); Pvalue = 0.542 when individually genotyped in the Replication sample (German); Pvalue = 0.533 in the combined dataset. OR (95% CI)=NS


Negative

rs7212506 
ABCA6


C 
Pvalue = 0.236 when genotyped individually in the test sample (NIMH)


Negative

rs7610043 
RBMS3


G 
Pvalue = 0.0008 when genotyped individually in the test sample (NIMH); Pvalue = 0.124 when individually genotyped in the Replication sample (German); Pvalue = 0.001 in the combined dataset. OR (95% CI)=1.21 (1.081.35)


Negative

rs2162126 
PHF17


G 
Pvalue = 0.004 when genotyped individually in the test sample (NIMH); Pvalue = 0.5516 when individually genotyped in the Replication sample (German); Pvalue = 0.21 in the combined dataset. OR (95% CI)=NS


Negative

rs2255317 
RPL30
MATN2


G 
Pvalue = 0.095 when genotyped individually in the test sample (NIMH)


Negative

rs2291182 
CABS1


G 
Pvalue = 0.011 when genotyped individually in the test sample (NIMH); Pvalue = 0.436 when individually genotyped in the Replication sample (German); Pvalue = 0.027 in the combined dataset. OR (95% CI)=1.25 (1.021.52)


Negative

rs2360111 
NXN


G 
Pvalue = 0.0007 when genotyped individually in the test sample (NIMH); Pvalue = 0.048 when individually genotyped in the Replication sample (German); Pvalue = 0.0003 in the combined dataset. OR (95% CI)=1.23 (1.101.37)


Negative

rs335929 
AQP4
AQP4AS1


C 
Pvalue = 0.01 when genotyped individually in the test sample (NIMH); Pvalue = 0.097 when individually genotyped in the Replication sample (German); Pvalue = 0.004 in the combined dataset. OR (95% CI)=1.23 (1.071.41)


Negative

rs3736456 
CYP4V2


C 
Pvalue = 0.231 when genotyped individually in the test sample (NIMH)


Negative

rs3762685 
PLSCR4


G 
Pvalue = 7.50E05 when genotyped individually in the test sample (NIMH); Pvalue = 0.293 when individually genotyped in the Replication sample (German); Pvalue = 0.0009 in the combined dataset. OR (95% CI)=1.22 (1.081.36)


Trend

rs4148776 
ABCB11


C 
Pvalue = 0.049 when genotyped individually in the test sample (NIMH); Pvalue = 0.418 when individually genotyped in the Replication sample (German); Pvalue = 0.062 in the combined dataset. OR (95% CI)=NS


Negative

rs7683874 
SORCS2


G 
Pvalue = 0.041 when genotyped individually in the test sample (NIMH); Pvalue = 0.006 when individually genotyped in the Replication sample (German); Pvalue = 0.0006 in the combined dataset. OR (95% CI)=1.51 (1.191.92)

significant at the P < 0.05 level in both samples.
significant at the P < 0.05 level in both samples.

Negative

rs7660807 
AMTN


G 
Pvalue = 0.001 when genotyped individually in the test sample (NIMH); Pvalue = 0.266 when individually genotyped in the Replication sample (German); Pvalue = 0.004 in the combined dataset. OR (95% CI)=1.33 (1.101.61)


Negative

rs7933829 
C11orf44


C 
Pvalue = 0.002 when genotyped individually in the test sample (NIMH); Pvalue = 0.538 when individually genotyped in the Replication sample (German); Pvalue = 0.023 in the combined dataset. OR (95% CI)=1.18 (1.031.33)


Negative

rs7812884 
CSMD1


A 
Pvalue = 0.174 when genotyped individually in the test sample (NIMH)


Negative

rs942518 
DFNB31


G 
Pvalue = 0.035 when genotyped individually in the test sample (NIMH); Pvalue = 0.001 when individually genotyped in the Replication sample (German); Pvalue = 0.0001 in the combined dataset. OR (95% CI)=1.44 (1.201.74)


Negative

rs9315885 
DGKH
MAPK6PS3


T 
Pvalue = 0.005 when genotyped individually in the test sample (NIMH); Pvalue = 0.006 when individually genotyped in the Replication sample (German); Pvalue = 0.0001 in the combined dataset. OR (95% CI)=1.26 (1.121.42)

significant at the P < 0.05 level in both samples.
significant at the P < 0.05 level in both samples.

Negative

rs9863764 
GRM7


G 
Pvalue = 0.137 when genotyped individually in the test sample (NIMH)


Negative

rs9513877 
NALCN


G 
Pvalue = 0.0005 when genotyped individually in the test sample (NIMH); Pvalue = 0.021 when individually genotyped in the Replication sample (German); Pvalue = 8.10E05 in the combined dataset. OR (95% CI)=1.26 (1.121.41)


Trend
