Region Report

Basic Info

Region Name	Chr 20
Chromosome Position	chr20:0-64444167
No. of Studies (Positive/Negative/Trend)	4(0/3/1)

Region related studies (count: 4)

Reference	Markers	Statistical Values	Author Comments	Result Category
Foroud, T.,2000	D20S173	Genome-Wide Linkage Results: LOD = 1.7 on Model I, LOD = 0.5...... Genome-Wide Linkage Results: LOD = 1.7 on Model I, LOD = 0.5 on Model II, LOD = 0.4 on Model III More...	No significant linkage was found in this region. No significant linkage was found in this region.	Negative
Badner, J. A.,2002		Meta analysis: Location: 40, Single Analysis MSP = 0.003, Be...... Meta analysis: Location: 40, Single Analysis MSP = 0.003, Best Analysis MSP = 0.003 More...	No significant linkage was found in this region. No significant linkage was found in this region.	Negative
Murphy, V. E.,2000	D20S174	Linkage analysis: broad model, NPL = 0.252, P-value = 0.39; ...... Linkage analysis: broad model, NPL = 0.252, P-value = 0.39; narrow model, NPL = 0.196, P-value = 0.38 More...	No significant linkage was found in this region. No significant linkage was found in this region.	Negative
Ross, J.,2008	D20S473 and D20S604	Multipoint linkage analysis: BPII-Rec model, the highest mul...... Multipoint linkage analysis: BPII-Rec model, the highest multipoint score was 3.0 More...	Suggestive linkage was found in this region. Suggestive linkage was found in this region.	Trend

Region related genes (count: 28)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
RIN2	Ras and Rab interactor 2	20p11.22	1(0/0/1)
TGM2	transglutaminase 2	20q12	1(1/0/0)
DOK5	docking protein 5	20q13.2	1(1/0/0)
PARD6B	par-6 family cell polarity regulator beta	20q13.13	1(0/0/1)
CDC25B	cell division cycle 25B	20p13	1(0/1/0)
SEMG2	semenogelin II	20q12-q13.1	1(1/0/0)
SNAP25	synaptosomal-associated protein, 25kDa	20p12-p11.2	2(2/0/0)
PROKR2	prokineticin receptor 2	20p12.3	1(1/0/0)
MACROD2	MACRO domain containing 2	20p12.1	2(0/1/1)
TPX2	TPX2, microtubule-associated	20q11.2	1(1/0/0)
PHF20	PHD finger protein 20	20q11.22-q11.23	1(0/1/0)
ID1	inhibitor of DNA binding 1, dominant negative helix-loop-helix protein	20q11	1(0/0/1)
LINC01370	long intergenic non-protein coding RNA 1370	20q12	1(0/0/1)
PLCG1	phospholipase C, gamma 1	20q12-q13.1	1(0/1/0)
CSNK2A1	casein kinase 2, alpha 1 polypeptide	20p13	2(0/2/0)
GSS	glutathione synthetase	20q11.2	1(0/0/1)
DDX27	DEAD (Asp-Glu-Ala-Asp) box polypeptide 27	20q13.13	1(0/1/0)
PTPRT	protein tyrosine phosphatase, receptor type, T	20q12-q13	2(0/1/1)
GNAS	GNAS complex locus	20q13.2-q13.3	1(0/1/0)
HNF4A	hepatocyte nuclear factor 4, alpha	20q13.12	1(1/0/0)
KCNQ2	potassium channel, voltage gated KQT-like subfamily Q, member 2	20q13.33	1(1/0/0)
TRPC4AP	transient receptor potential cation channel, subfamily C, member 4 associated protein	20q11.23	1(1/0/0)
SEL1L2	sel-1 suppressor of lin-12-like 2 (C. elegans)	20p12.1	1(0/1/0)
MMP9	matrix metallopeptidase 9	20q13.12	1(1/0/0)
SNAI1	snail family zinc finger 1	20q13.2	1(1/0/0)
SLC4A11	solute carrier family 4, sodium borate transporter, member 11	20p13	1(0/1/0)
CHRNA4	cholinergic receptor, nicotinic, alpha 4 (neuronal)	20q13.33	1(1/0/0)
RSPO4	R-spondin 4	20p13	1(0/1/0)

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Region: chr20:0..64444167 View in gBrowse