BDgene

Gene Report

Basic Info
Approved Symbol GNAS
Previous Symbol GNAS1
Symbol Alias NESP55, NESP, GNASXL, GPSA, SCG6
Approved Name GNAS complex locus
Previous Name guanine nucleotide binding protein (G protein), alpha stimulating activity polypeptide 1
Name Alias secretogranin VI
Location 20q13.2-q13.3
Position chr20:58839718-58911192, 1
External Links HGNC: 4392
Entrez Gene: 2778
Ensembl: ENSG00000087460
UCSC: uc002xzt.4
No. of Studies 1 (Positive: 0; Negative: 1; trend: 0)
Overlap with SZ? YES
Overlap with MDD? YES
Gene related studies (count: 1)
Reference Tested Markers Statistical Values/Author Comments Result Category Comment on Study
McDonald, M. L.,2012 SNP: rs35113254, rs6026565, rs6064714 None of the association tests of the tagSNPs with either BPD I or BPD II reached genome-wide significance (P < 5E-08). Negative Comment on Study
Gene functional annotation
Gene related GO terms (count: 71)

GO terms by PBA (count: 7)

GO terms by database search (count: 64)


Gene related KEGG pathways (count: 7)

KEGG pathways by PBA (count: 3)

KEGG pathways by database search (count: 4)


Gene related BioCarta pathways (count: 13)

Gene related interactors from protein-protein interactions data in HPRD (count: 23)

Related other genetic factors
Gene related SNPs (count: 4)

Literature-origin SNPs (count: 3)

LD-proxies (count: 1)


Gene related CNVs (count: 0)

Gene related other variants (count: 0)

Gene related regions (count: 3)

Overlap with schizophrenia (SZ) and major depressive disorder (MDD)
Gene relationship with SZ

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with SZ from candidate gene intersection analysis (count: 1)


Gene relationship with MDD

Overlap with MDD from cross-disorder studies (count: 0)

Overlap with MDD from candidate gene intersection analysis (count: 1)


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Region: chr20:58839718..58911192 View in gBrowse
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