BDgene

Gene Report

Basic Info
Approved Symbol TRPC4AP
Previous Symbol C20orf188
Symbol Alias DKFZP727M231, DKFZp586C1223, dJ756N5.2, TRRP4AP, PPP1R158
Approved Name transient receptor potential cation channel, subfamily C, member 4 associated protein
Previous Name chromosome 20 open reading frame 188
Name Alias protein phosphatase 1, regulatory subunit 158
Location 20q11.23
Position chr20:35002404-35092871, -1
External Links HGNC: 16181
Entrez Gene: 26133
Ensembl: ENSG00000100991
UCSC: uc002xbk.3
No. of Studies 1 (Positive: 1; Negative: 0; trend: 0)
Overlap with SZ? NO
Overlap with MDD? NO
Gene related studies (count: 1)
Reference Tested Markers Statistical Values/Author Comments Result Category Comment on Study
Green, E. K.,2012 SNP: rs3818253 BD ImmunoChip:P-value = 0.00000265,OR = 1.333;ImmunoChip, PGC-BD combined data:P-balue = 0.0000000388,OR = 1.164 The SNP showed a significant association with BD. Positive Comment on Study
Gene functional annotation
Gene related GO terms (count: 9)

GO terms by PBA (count: 1)

GO terms by database search (count: 8)


Gene related KEGG pathways (count: 0)

Gene related BioCarta pathways (count: 0)

Gene related interactors from protein-protein interactions data in HPRD (count: 8)

Related other genetic factors
Gene related SNPs (count: 18)

Literature-origin SNPs (count: 1)

LD-proxies (count: 17)


Gene related CNVs (count: 0)

Gene related other variants (count: 0)

Gene related regions (count: 3)

Overlap with schizophrenia (SZ) and major depressive disorder (MDD)
Gene relationship with SZ

Gene relationship with MDD

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Region: chr20:35002404..35092871 View in gBrowse
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