SNP |
Related Gene(s) |
Allele Change |
Risk Allele |
Statistical Values |
Author Comments |
Result Category |
rs1042779 |
ITIH1
|
A/G |
|
NIMH/Pritzker: OR (95% CI)=1.2(1.04-1.38), P-value = 0.015; GSK(reduced sample): OR (95% CI)=1.31(1.11-1.54), P-value = 0.0012; WTCCC: OR (95% CI)=1.16(1.07-1.25), P-value = 0.00012; 3-study meta-analysis: OR (95% CI)=1.19(1.11-1.27), P-value = 0.00000018; Heterogeneity: I2%=0, P-value = 0.4
|
|
Trend
|
rs11711888 |
PTPRG
|
A/G |
|
NIMH/Pritzker: OR (95% CI)=3.31(1.84-5.96), P-value = 0.000067; GSK(complete sample): OR (95% CI)=2.2(1.24-3.91), P-value = 0.0071; 2-study meta-analysis: OR (95% CI)=2.69(1.77-4.08), P-value = 0.0000035; Heterogeneity: I2%=0, P-value = 0.33
|
|
Trend
|
rs10246960 |
|
T/C |
|
NIMH/Pritzker: OR (95% CI)=1.41(1.16-1.71), P-value = 0.00061; GSK(complete sample): OR (95% CI)=1.33(1.1-1.61), P-value = 0.0034; 2-study meta-analysis: OR (95% CI)=1.37(1.19-1.57), P-value = 0.0000096; Heterogeneity: I2%=0, P-value = 0.68
|
|
Trend
|
rs1035050 |
|
T/C |
|
NIMH/Pritzker: OR (95% CI)=1.16(1.01-1.34), P-value = 0.038; GSK(reduced sample): OR (95% CI)=1.12(0.96-1.31), P-value = 0.13; WTCCC: OR (95% CI)=1.19(1.09-1.29), P-value = 0.000069; 3-study meta-analysis: OR (95% CI)=1.17(1.09-1.25), P-value = 0.000009; Heterogeneity: I2%=0, P-value = 0.84
|
|
Trend
|
rs13409348 |
CTNNA2
|
G/C |
|
NIMH/Pritzker: OR (95% CI)=1.12(0.95-1.32), P-value = 0.18; GSK(reduced sample): OR (95% CI)=1.2(1.00-1.43), P-value = 0.045; WTCCC: OR (95% CI)=1.22(1.12-1.33), P-value = 0.0000071; 3-study meta-analysis: OR (95% CI)=1.2(1.11-1.29), P-value = 0.0000027; Heterogeneity: I2%=0, P-value = 0.67
|
|
Trend
|
rs17169582 |
|
G/A |
|
NIMH/Pritzker: OR (95% CI)=1.21(0.94-1.55), P-value = 0.14; GSK(reduced sample): OR (95% CI)=1.11(0.86-1.43), P-value = 0.42; WTCCC: OR (95% CI)=1.3(1.16-1.46), P-value = 0.0000075; 3-study meta-analysis: OR (95% CI)=1.26(1.14-1.39), P-value = 0.0000098; Heterogeneity: I2%=0, P-value = 0.5
|
|
Trend
|
rs12568099 |
|
T/C |
|
NIMH/Pritzker: OR (95% CI)=1.48(0.90-2.42), P-value = 0.12; GSK(reduced sample): OR (95% CI)=2.17(1.26-3.77), P-value = 0.0054; WTCCC: OR (95% CI)=1.49(1.20-1.85), P-value = 0.00031; 3-study meta-analysis: OR (95% CI)=1.56(1.28-1.9), P-value = 0.0000098; Heterogeneity: I2%=0, P-value = 0.44
|
|
Trend
|
rs12998006 |
|
T/C |
|
NIMH/Pritzker: OR (95% CI)=1.27(1.07-1.5), P-value = 0.0061; GSK(complete sample): OR (95% CI)=1.42(1.21-1.66), P-value = 0.000013; 2-study meta-analysis: OR (95% CI)=1.35(1.2-1.51), P-value = 0.00000076; Heterogeneity: I2%=0, P-value = 0.33
|
|
Trend
|
rs2242663 |
CTSF
ACTN3
|
T/C |
|
NIMH/Pritzker: OR (95% CI)=1.29(1.09-1.53), P-value = 0.0028; GSK(reduced sample): OR (95% CI)=1.32(1.10-1.59), P-value = 0.0024; WTCCC: OR (95% CI)=1.15(1.05-1.25), P-value = 0.0015; 3-study meta-analysis: OR (95% CI)=1.2(1.11-1.29), P-value = 0.0000013; Heterogeneity: I2%=33, P-value = 0.23
|
|
Trend
|
rs2537859 |
|
T/C |
|
NIMH/Pritzker: OR (95% CI)=1.05(0.91-1.20), P-value = 0.53; GSK(reduced sample): OR (95% CI)=1.41(1.21-1.65), P-value = 0.000011; WTCCC: OR (95% CI)=1.14(1.06-1.23), P-value = 0.00071; 3-study meta-analysis: OR (95% CI)=1.16(1.09-1.24), P-value = 0.0000042; Heterogeneity: I2%=76, P-value = 0.014
|
|
Trend
|
rs17418283 |
MCTP1
|
C/T |
|
NIMH/Pritzker: OR (95% CI)=1.09(0.93-1.28), P-value = 0.31; GSK(reduced sample): OR (95% CI)=1.19(1.01-1.41), P-value = 0.038; WTCCC: OR (95% CI)=1.25(1.15-1.36), P-value = 0.000000097; 3-study meta-analysis: OR (95% CI)=1.21(1.13-1.3), P-value = 0.00000013; Heterogeneity: I2%=15, P-value = 0.31
|
|
Trend
|
rs17498325 |
|
G/A |
|
NIMH/Pritzker: OR (95% CI)=1.42(1.09-1.87), P-value = 0.01; GSK(complete sample): OR (95% CI)=1.46(1.2-1.79), P-value = 0.00021; 2-study meta-analysis: OR (95% CI)=1.45(1.23-1.71), P-value = 0.0000091; Heterogeneity: I2%=0, P-value = 0.88
|
|
Trend
|
rs6494849 |
RNU6-745P
|
A/C |
|
NIMH/Pritzker: OR (95% CI)=1.24(1.00-1.54), P-value = 0.049; GSK(reduced sample): OR (95% CI)=1.11(0.88-1.38), P-value = 0.38; WTCCC: OR (95% CI)=1.26(1.14-1.40), P-value = 0.00001; 3-study meta-analysis: OR (95% CI)=1.23(1.13-1.35), P-value = 0.0000065; Heterogeneity: I2%=0, P-value = 0.57
|
|
Trend
|
rs472913 |
NFIX
|
C/G |
|
NIMH/Pritzker: OR (95% CI)=1.12(0.97-1.29), P-value = 0.11; GSK(reduced sample): OR (95% CI)=1.17(1.00-1.36), P-value = 0.051; WTCCC: OR (95% CI)=1.20?(1.11-1.28), P-value = 0.00000063; 3-study meta-analysis: OR (95% CI)=1.18(1.11-1.25), P-value = 0.0000002; Heterogeneity: I2%=0, P-value = 0.72
|
|
Trend
|
rs2905072 |
GFI1B
|
A/G |
|
NIMH/Pritzker: OR (95% CI)=1.43(1.20-1.70), P-value = 0.000058; GSK(reduced sample): OR (95% CI)=1.14(0.95-1.38), P-value = 0.16; WTCCC: OR (95% CI)=1.16(1.05-1.28), P-value = 0.0043; 3-study meta-analysis: OR (95% CI)=1.21(1.11-1.32), P-value = 0.0000064; Heterogeneity: I2%=56, P-value = 0.1
|
|
Trend
|
rs2813164 |
|
G/A |
|
NIMH/Pritzker: OR (95% CI)=1.39(1.19-1.62), P-value = 0.000021; GSK(complete sample): OR (95% CI)=1.24(1.07-1.44), P-value = 0.0048; 2-study meta-analysis: OR (95% CI)=1.31(1.18-1.46), P-value = 0.00000083; Heterogeneity: I2%=9, P-value = 0.3
|
|
Trend
|
rs7250872 |
REXO1
ATP8B3
|
T/C |
|
NIMH/Pritzker: OR (95% CI)=1.18(1.01-1.37), P-value = 0.035; GSK(reduced sample): OR (95% CI)=1.33(1.14-1.56), P-value = 0.00043; WTCCC: OR (95% CI)=1.18(1.06-1.30), P-value = 0.0024; 3-study meta-analysis: OR (95% CI)=1.21(1.12-1.31), P-value = 0.0000017; Heterogeneity: I2%=0, P-value = 0.41
|
|
Trend
|
rs6990255 |
|
T/C |
|
NIMH/Pritzker: OR (95% CI)=1.41(1.00-2.00), P-value = 0.048; GSK(reduced sample): OR (95% CI)=1.28(0.91-1.81), P-value = 0.16; WTCCC: OR (95% CI)=1.33?(1.16-1.51), P-value = 0.000057; 3-study meta-analysis: OR (95% CI)=1.33(1.18-1.51), P-value = 0.0000058; Heterogeneity: I2%=0, P-value = 0.92
|
|
Trend
|
rs6901299 |
TRDN
|
G/A |
|
NIMH/Pritzker: OR (95% CI)=1.05(0.86-1.27), P-value = 0.66; GSK(reduced sample): OR (95% CI)=1.18(0.95-1.46), P-value = 0.12; WTCCC: OR (95% CI)=1.26(1.15-1.39), P-value = 0.000002; 3-study meta-analysis: OR (95% CI)=1.21(1.11-1.31), P-value = 0.0000097; Heterogeneity: I2%=35, P-value = 0.21
|
|
Trend
|
rs6733011 |
KIAA1211L
|
G/A |
|
NIMH/Pritzker: OR (95% CI)=1.11(0.95-1.29), P-value = 0.19; GSK(reduced sample): OR (95% CI)=1.13(0.96-1.32), P-value = 0.14; WTCCC: OR (95% CI)=1.2(1.11-1.29), P-value = 0.0000019; 3-study meta-analysis: OR (95% CI)=1.17(1.1-1.25), P-value = 0.0000026; Heterogeneity: I2%=0, P-value = 0.59
|
|
Trend
|
rs7867133 |
GDA
|
A/G |
|
NIMH/Pritzker: OR (95% CI)=1.23(1.04-1.44), P-value = 0.013; GSK(complete sample): OR (95% CI)=1.39(1.19-1.63), P-value = 0.000033; 2-study meta-analysis: OR (95% CI)=1.31(1.17-1.47), P-value = 0.0000039; Heterogeneity: I2%=20, P-value = 0.26
|
|
Trend
|
rs7593459 |
|
T/A |
|
NIMH/Pritzker: OR (95% CI)=1.27(1.09-1.48), P-value = 0.0019; GSK(complete sample): OR (95% CI)=1.31(1.14-1.51), P-value = 0.00014; 2-study meta-analysis: OR (95% CI)=1.29(1.16-1.44), P-value = 0.0000016; Heterogeneity: I2%=0, P-value = 0.76
|
|
Trend
|
rs7427021 |
|
G/A |
|
NIMH/Pritzker: OR (95% CI)=1.05(0.91-1.23), P-value = 0.49; GSK(reduced sample): OR (95% CI)=1.25(1.06-1.47), P-value = 0.0089; WTCCC: OR (95% CI)=1.17(1.09-1.26), P-value = 0.000015; 3-study meta-analysis: OR (95% CI)=1.16(1.09-1.24), P-value = 0.0000049; Heterogeneity: I2%=14, P-value = 0.31
|
|
Trend
|