SNP Report

Basic Info
Name rs7427021 dbSNP Ensembl
Location chr3:164044176 - 164044176(1)
Variant Alleles A/G
Ancestral Allele A
Minor Allele A
Minor Allele Frequence 0.441893
No. of Studies 1 (Positive: 0; Negative: 0; Trend: 1)
Source Literature
Overlap with SZ? NO
Overlap with MDD? NO

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Scott, L. J.,2009 G/A NIMH/Pritzker: OR (95% CI)=1.05(0.91-1.23), P-value = 0.49; ...... NIMH/Pritzker: OR (95% CI)=1.05(0.91-1.23), P-value = 0.49; GSK(reduced sample): OR (95% CI)=1.25(1.06-1.47), P-value = 0.0089; WTCCC: OR (95% CI)=1.17(1.09-1.26), P-value = 0.000015; 3-study meta-analysis: OR (95% CI)=1.16(1.09-1.24), P-value = 0.0000049; Heterogeneity: I2%=14, P-value = 0.31 More... Trend

SNP related genes (count: 0)

SNPs in LD with rs7427021 (count: 29) View in gBrowse (chr3:164019813..164171596 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2<=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 29)

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)