BDgene

SNP Report

Basic Info
Name rs7593459 dbSNP Ensembl
Location chr2:49468562 - 49468562(1)
Variant Alleles A/T
Ancestral Allele A
Minor Allele T
Minor Allele Frequence 0.369409
No. of Studies 1 (Positive: 0; Negative: 0; Trend: 1)
Source Literature
Overlap with SZ? NO
Overlap with MDD? NO

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Scott, L. J.,2009 T/A NIMH/Pritzker: OR (95% CI)=1.27(1.09-1.48), P-value = 0.0019...... NIMH/Pritzker: OR (95% CI)=1.27(1.09-1.48), P-value = 0.0019; GSK(complete sample): OR (95% CI)=1.31(1.14-1.51), P-value = 0.00014; 2-study meta-analysis: OR (95% CI)=1.29(1.16-1.44), P-value = 0.0000016; Heterogeneity: I2%=0, P-value = 0.76 More... Trend

SNP related genes (count: 0)

SNPs in LD with rs7593459 (count: 0) View in gBrowse (chr2:49468562..49468562 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)

Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback Acknowledgements
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Last update: March 31, 2016