SNP Report

Basic Info

Name	rs17418283 dbSNP Ensembl
Location	chr5:94818883 - 94818883(1)
Variant Alleles	T/C
Ancestral Allele	T
Minor Allele	C
Minor Allele Frequence	0.144768
Functional Annotation	intron_variant.
Consequence to Transcript	intron_variant(ENST00000312216, ENST00000429576, ENST00000505078, ENST00000508509, ENST00000512425, ENST00000515393)
No. of Studies	1 (Positive: 0; Negative: 0; Trend: 1)
Source	Literature
Overlap with SZ?	NO
Overlap with MDD?	NO

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result Category
Scott, L. J.,2009	C/T		NIMH/Pritzker: OR (95% CI)=1.09(0.93-1.28), P-value = 0.31; ...... NIMH/Pritzker: OR (95% CI)=1.09(0.93-1.28), P-value = 0.31; GSK(reduced sample): OR (95% CI)=1.19(1.01-1.41), P-value = 0.038; WTCCC: OR (95% CI)=1.25(1.15-1.36), P-value = 0.000000097; 3-study meta-analysis: OR (95% CI)=1.21(1.13-1.3), P-value = 0.00000013; Heterogeneity: I²%=15, P-value = 0.31 More...		Trend

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
MCTP1	multiple C2 domains, transmembrane 1	5q15	Mapped by Literature SNP

SNPs in LD with rs17418283 (count: 0) View in gBrowse (chr5:94818883..94818883 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)