SNP Report

Basic Info
Name rs6494849 dbSNP Ensembl
Location chr15:70188275 - 70188275(1)
Variant Alleles C/A/T
Ancestral Allele A
Minor Allele A
Minor Allele Frequence 0.255192
Functional Annotation upstream_gene_variant.
Consequence to Transcript upstream_gene_variant(ENST00000363346)
No. of Studies 1 (Positive: 0; Negative: 0; Trend: 1)
Source Literature
Overlap with SZ? NO
Overlap with MDD? NO

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Scott, L. J.,2009 A/C NIMH/Pritzker: OR (95% CI)=1.24(1.00-1.54), P-value = 0.049;...... NIMH/Pritzker: OR (95% CI)=1.24(1.00-1.54), P-value = 0.049; GSK(reduced sample): OR (95% CI)=1.11(0.88-1.38), P-value = 0.38; WTCCC: OR (95% CI)=1.26(1.14-1.40), P-value = 0.00001; 3-study meta-analysis: OR (95% CI)=1.23(1.13-1.35), P-value = 0.0000065; Heterogeneity: I2%=0, P-value = 0.57 More... Trend

SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
RNU6-745P RNA, U6 small nuclear 745, pseudogene 15q23 Mapped by Literature SNP

SNPs in LD with rs6494849 (count: 0) View in gBrowse (chr15:70188275..70188275 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)