BDgene

SNP Report

Basic Info
Name rs1035050 dbSNP Ensembl
Location chr17:49486650 - 49486650(1)
Variant Alleles T/C
Ancestral Allele T
Minor Allele C
Minor Allele Frequence 0.409345
No. of Studies 1 (Positive: 0; Negative: 0; Trend: 1)
Source Literature
Overlap with SZ? NO
Overlap with MDD? NO

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Scott, L. J.,2009 T/C NIMH/Pritzker: OR (95% CI)=1.16(1.01-1.34), P-value = 0.038;...... NIMH/Pritzker: OR (95% CI)=1.16(1.01-1.34), P-value = 0.038; GSK(reduced sample): OR (95% CI)=1.12(0.96-1.31), P-value = 0.13; WTCCC: OR (95% CI)=1.19(1.09-1.29), P-value = 0.000069; 3-study meta-analysis: OR (95% CI)=1.17(1.09-1.25), P-value = 0.000009; Heterogeneity: I2%=0, P-value = 0.84 More... Trend

SNP related genes (count: 0)

SNPs in LD with rs1035050 (count: 0) View in gBrowse (chr17:49486650..49486650 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)

Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback Acknowledgements
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Last update: March 31, 2016