BDgene

Other Variant Report

Basic Info
Name BDNF Val66Met
Type point mutation
Related Gene BDNF
No. of Study 21 (Positive: 11; Negative 10; Trend: 0)
Overlap with SZ? YES
Overlap with MDD? YES

Variant related studies (count: 21)
Reference Allele Change Risk Allele Statistical Values Author Comments Result Category
Chepenik, L. G.,2009 Val66Met The ROI analyses:1.genotype:P-value < 0.001, Carriers of the BDNF met allele:LSmean-met=2433, SE-met=115; LSmean-val=2950, SE-val=86.BD met carriers: LSmean-HCval=3166, SE=134; LSmean-HCmet=2683, SE=178; LSmean-BDval=2734, SE=125; LSmean-BDmet=2181, SE=149 2.group:P-value < 0.01, Case-control:LSmean-BD=2458, SE-BD=100;LSmean-HC=2925, SE-HC=100.
We found that hippocampus volumes were significantly smaller..... More
Positive
Chen, S. L., 2014 Met/Val Genotype: P-value=0.155 for BP-1 patients, P-value=0.112 for BP-II patients. Alley frequency: P-value=0.249 for BP-1 patients, P-value=0.255 for BP-II patients.
the distribution of the BDNF Val66Met SNP was not different ..... More
Negative
Huang, C. C.,2012 Val/Met allelic P-vaue=0.13, X2=4.09; genotypic P-value=0.21, X2=5.91
The BDNF Val66Met polymorphism was not associated with eithe..... More
Negative
Tang, J., 2008 C/T Genotypic X2=1.538 (df=2), P-value = 0.463; Allelic X2=1.277 (df=1), P-value = 0.285
No significant difference was found in the frequency of the ..... More
Negative
Skibinska, M., 2004 Val/Met bipolar I+II vs. control (males and females) -c2 =1.831, df=2, p=0.4 for genotypes, p=0.406 for alleles; bipolar I+II vs. control (males)-c 2 =0.399, df=2, p=0.819 for genotypes, p=0.673 for alleles; bipolar I+II vs. control (females) -c 2 =1.678, df=2, p=0.432 for genotypes, p=0.464 for alleles.
The allele and genotype distribution for the patients with s..... More
Negative
Tramontina, J., 2007 Val/Met chi-square P-value > 0.05
No significant differences were found in the frequency of th..... More
Negative
Matsuo, K.,2009 Val66Met Imaging Data:Val/Val and Val/Met subjects (case-control), ACC GM volumes:left ACC, x= 7, y=13, z=25, t=3.55, k=66, P=0.011; right ACC, x=12, y=25, z=23, t=3.24, k=133, P=0.013.Three-way interaction:left ACC, F1, 76=1.15, P=0.29;right ACC, F1, 76=1.16, P=0.69.The diagnosis by genotype interaction:left ACC, F1, 76=5.69, P=0.02; right ACC, F1, 76=5.03, P=0.03.CVLT Performance:for diagnosis (F1, 69=4.39, P=0.04), for genotype (F1, 69=0.82, P=0.63), for the interaction between diagnosis and genotype (F4.1, 283.3=0.86, P=0.48).
Left and right anterior cingulate GM volumes showed a signif..... More
Positive
Nassan, M., 2015 Val/Met
Comparison of adult BD cases with controls provided nonsigni..... More
Positive
Sklar, P.,2002 Val66Met Association analysis:TDT, Hopkins sample, T/NT=53/34, chi square=4.1, P-value = 0.042, OR=1.56, OR(95%CI)=1.05-2.47;NIMH sample, T/NT=70/55, chi square=1.8, P-value = 0.09, OR=1.27, OR(95%CI)=0.92-1.84;UK sample, T/NT=38/32, chi square=0.51, P-value = 0.237, OR=1.19, OR(95%CI)=0.77-1.96;Replication samples(NIMH+UK), T/NT=108/87, chi square=2.26, P-value = 0.066, OR=1.24, OR(95%CI)=0.95-1.66 Significant associations were found in Hopkins sample. Positive
Neves-Pereira, M.,2002 val66met Association analysis:FBAT, allele A, Z score=-3.415, P-value = 0.00064;allele G, Z score=3.415, P-value = 0.00064 Significant associations were found in BPD patients. Positive
Hamshere, M. L.,2012 Val66Met Logistic Regression Analysis:for Val/Val, OR=1.1, 95%CI=0.47-2.60, P-value = 0.82 in BP-I;;OR=0.4, 95%CI=0.16-0.97, P-value = 0.04* in BP-II.For Val/Met, OR=1.18, 95%CI=0.54-2.58, P-value = 0.67 in BP-I;;OR=1.39, 95%CI=0.69-2.80, P-value = 0.36 in BP-II Significant association was observed in BP-II. Positive
De Luca, V.,2008 G The Val66 (G) allelewas transmitted more frequently with BD (maternal meioses: 46/22, p = 0.003; paternal meioses: 55/30, p = 0.006).
Significant genetic association between BD and the BDNF Val6..... More
Positive
Lee, S. Y.,2012(b) Val/Met Val Chi square test:genotype,P-value = 0.79,chi square = 1.73;allele,P-value = 0.64,chi square = 0.88 No evidence support the association of this variant with BD Negative
Kunugi, H.,2004 Val66Met Association analysis:chi square test, Genotypewise comparisons: total patients vs. control subjects:chi square=0, P-value = 0.98; bipolar I vs. control subjects: chi square=0.3, P-value = 0.86; bipolar II vs. control subjects: chi square=0.8, P-value = 0.69. Allelewise comparisons: total patients vs. control subjects: chi square=0.0, P-value = 0.83; bipolar I vs. control subjects: chi square=0.0, P-value = 0.96; bipolar II vs. control subjects:chi square=0.0, P-value = 0.94. No significant association was observed in BD. Negative
Muller, D. J., 2006 A/G TDTPHASE P-value = 0.001, df=1, LRS=10.62; P-value = 0.01 for bipolar disorder I, P-value = 0.02 for bipolar disorder II
Significant association between the total sample and the BDN..... More
Positive
Lee, S. Y.,2012(a) Val/Met Val Chi square test:genotype,P-value = 0.75,chi square = 1.94;allele,P-value = 0.83,chi square = 0.37 No evidence support the association of this variant with BD Negative
Mick, E.,2009 Val/Met Val TDT:OR=1.23, 95%CI=0.79-1.92, X2=0.8, P-value = 0.37
We failed to identify significant associations with this can..... More
Negative
Hong, C. J.,2003 Val66Met Association analysis:genotype P-value = 0.762, allele P-value = 0.489 No significant association was observed in BD. Negative
Green, E. K., 2006 Val/Met allelic P-value = 0.39, X2=0.73, df=1, OR (95% CI)=1.07 (0.92-1.22), genotypic P-value = 0.68, X2=0.77, df=2 for Bipolar I and II disorder; allelic P-value = 0.36, X2=0.83, df=1, OR (95% CI)=1.07 (0.93-1.24), genotypic P-value = 0.64, X2=0.89, df=2 for Bipolar I disorder; allelic P-value = 0.98, X2=0.00, df=1, OR (95% CI)=1.00 (0.70-1.45), genotypic P-value = 0.96, X2=0.09, df=2 for Bipolar II disorder; allelic P-value = 0.0040, X2=8.28, df=1, OR (95% CI)=1.74 (1.19-2.56), genotypic P-value = 0.015, X2=8.47, df=2 for rapid-cycling bipolar disorder; re-analysis P-value < 0.03, one-tailed test
No differences in allele or genotype frequencies were seen b..... More
Positive
Geller, B.,2004 Val66Met Association analysis:FBAT, chi square=6.0, 1df, P-value = 0.14 Significant association was found in BPD patients. Positive
Chang, Y. H.,2013 Val66Met Met/Val:BD-II without AD, OR = 0.64,95%CI = 0.17–2.36, P-value = 0.5;BD-II without AD, OR = 1.33m95%CI = 0.23–7.60, P-value = 0.74;Val/Val:BD-II without AD, OR = 0.55,95%CI = 0.20–1.51, P-value = 0.25;BD-II without AD, OR = 0.48,95%CI = 0.10–2.18, P-value = 0.34;Met/Val:BD-I without AD, OR = 0.82,95%CI = 0.20–3.35, P-value = 0.5;BD-I without AD, OR = 1.23,95%CI = 0.06–23.75, P-value = 0.89Val/Val:BD-I without AD, OR = 0.3,95%CI = 0.09–1.02, P-value = 0.05;BD-I without AD, OR = 2330000000,95%CI = 6.34E+09–8.54E+08, P-value = 0.0005 Significant association was observed. Positive

Overlap with SZ from cross-disorder studies (count: 2)
Reference Statistical Result Description Result Category
Chen, S. L., 2014 Genotype: P-value=0.373 for schizophrenia patients. Alley frequency: P-value=0.420 for schizophrenia patients. the distribution of the BDNF Val66Met SNP was not different between groups. Negative
Skibinska, M., 2004 schizophrenia vs. control (males and females) -c2 =3.118, df=2, p=0.21 for genotypes, p=0.26 for alleles; schizophrenia vs. control (males) -c 2 =1.468, df=2, p=0.48 for genotypes, p=0.312 for alleles; schizophrenia vs. control (females) -c 2 =2.708, df=2, p=0.258 for genotypes, p=0.482 for alleles. The allele and genotype distribution for the patients with schizophrenia or bipolar affective disorder did not differ significantly from controls. When groups were separated according to gender, there was also not any significant difference in allele and genotype distribution. Negative

Overlap with MDD from cross-disorder studies (count: 1)
Reference Statistical Result Description Result Category
Hong, C. J.,2003 Association analysis:genotype P-value = 0.598, allele P-value = 0.497 No significant association was observed in MDD. Negative