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GO Report
Basic Info
| ID | GO:0006816 |
|---|---|
| Name | calcium ion transport |
| Type | biological process |
| No. of Genes in BDgene | 14 |
| Source | Pathway by PBA |
PBA Result
| Pathway Name in Paper | Source | Reference | Data Set | Tool | Result Parameters | Result Link |
|---|---|---|---|---|---|---|
| GO: 0006816: Ca2+ ion transport | PBA paper | Askland, K.,2009 | NIMH | Fisher's exact test | Results given for gene sets with P < 0.01 from the NIMH PBA-BP data | |
| CALCIUM ION TRANSPORT | i-GSEA analysis | From NIMH | STEP1 | i-GSEA by using i-GSEA4GWAS | P-value< 0.001, FDR=0.0125 | Link in i-GSEA4GWAS |
GO related genes in BDgene (count: 14)
| Approved Symbol | Approved Name | Location | No. of Studies (Positive/Negative/Trend)  |
Evidence[PMID] |
|---|---|---|---|---|
| CHRNA4 | cholinergic receptor, nicotinic, alpha 4 (neuronal) | 20q13.33 | 1(1/0/0) | ISS |
| CACNA1D | calcium channel, voltage-dependent, L type, alpha 1D subunit | 3p14.3 | 1(1/0/0) | IDA[11160515] |
| GRIN3A | glutamate receptor, ionotropic, N-methyl-D-aspartate 3A | 9q31.1 | 1(0/1/0) | ISS |
| CHRNA7 | cholinergic receptor, nicotinic, alpha 7 (neuronal) | 15q13.3 | 4(2/2/0) | IDA[8145738]; IMP[10771023] |
| NMUR2 | neuromedin U receptor 2 | 5q33.1 | 1(0/1/0) | IDA[10899166] |
| CHRNB2 | cholinergic receptor, nicotinic, beta 2 (neuronal) | 1q21.3 | 1(1/0/0) | ISS |
| RYR2 | ryanodine receptor 2 (cardiac) | 1q43 | 1(1/0/0) | IDA[17921453] |
| P2RX4 | purinergic receptor P2X, ligand gated ion channel, 4 | 12q24.32 | 1(0/1/0) | IEA |
| CACNA2D1 | calcium channel, voltage-dependent, alpha 2/delta subunit 1 | 7q21-q22 | 2(0/0/2) | IDA[11160515] |
| TRPM2 | transient receptor potential cation channel, subfamily M, member 2 | 21q22.3 | 5(3/2/0) | TAS[9806837] |
| CACNB3 | calcium channel, voltage-dependent, beta 3 subunit | 12q13 | 1(0/0/1) | IDA[11160515] |
| FYN | FYN proto-oncogene, Src family tyrosine kinase | 6q21 | 1(1/0/0) | NAS[7822789] |
| CACNA1S | calcium channel, voltage-dependent, L type, alpha 1S subunit | 1q32 | 1(0/1/0) | IDA[9852570] |
| CAMK2A | calcium/calmodulin-dependent protein kinase II alpha | 5q32 | 2(1/1/0) | ISS |