BDgene

GO Report

Basic Info
ID GO:0006816
Name calcium ion transport
Type biological process
No. of Genes in BDgene  14
Source Pathway by PBA

PBA Result
Pathway Name in Paper Source Reference Data Set Tool Result Parameters Result Link
CALCIUM ION TRANSPORT i-GSEA analysis From NIMH STEP1 i-GSEA by using i-GSEA4GWAS P-value< 0.001, FDR=0.0125 Link in i-GSEA4GWAS
GO: 0006816: Ca2+ ion transport PBA paper Askland, K.,2009 NIMH Fisher's exact test Results given for gene sets with P < 0.01 from the NIMH PBA-BP data

GO related genes in BDgene (count: 14)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend) Evidence[PMID]
CHRNA4 cholinergic receptor, nicotinic, alpha 4 (neuronal) 20q13.33 1(1/0/0) ISS
CACNA1D calcium channel, voltage-dependent, L type, alpha 1D subunit 3p14.3 1(1/0/0) IDA[11160515]
GRIN3A glutamate receptor, ionotropic, N-methyl-D-aspartate 3A 9q31.1 1(0/1/0) ISS
CHRNA7 cholinergic receptor, nicotinic, alpha 7 (neuronal) 15q13.3 4(2/2/0) IDA[8145738]; IMP[10771023]
NMUR2 neuromedin U receptor 2 5q33.1 1(0/1/0) IDA[10899166]
CHRNB2 cholinergic receptor, nicotinic, beta 2 (neuronal) 1q21.3 1(1/0/0) ISS
RYR2 ryanodine receptor 2 (cardiac) 1q43 1(1/0/0) IDA[17921453]
P2RX4 purinergic receptor P2X, ligand gated ion channel, 4 12q24.32 1(0/1/0) IEA
CACNA2D1 calcium channel, voltage-dependent, alpha 2/delta subunit 1 7q21-q22 2(0/0/2) IDA[11160515]
TRPM2 transient receptor potential cation channel, subfamily M, member 2 21q22.3 5(3/2/0) TAS[9806837]
CACNB3 calcium channel, voltage-dependent, beta 3 subunit 12q13 1(0/0/1) IDA[11160515]
FYN FYN proto-oncogene, Src family tyrosine kinase 6q21 1(1/0/0) NAS[7822789]
CACNA1S calcium channel, voltage-dependent, L type, alpha 1S subunit 1q32 1(0/1/0) IDA[9852570]
CAMK2A calcium/calmodulin-dependent protein kinase II alpha 5q32 2(1/1/0) ISS