Gene Report

Basic Info
Approved Symbol CACNA2D1
Previous Symbol CACNL2A, CACNA2, MHS3, LINC01112
Symbol Alias lncRNA-N3
Approved Name calcium channel, voltage-dependent, alpha 2/delta subunit 1
Previous Name long intergenic non-protein coding RNA 1112
Location 7q21-q22
Position chr7:81946444-82443798, -1
External Links HGNC: 1399
Entrez Gene: 781
Ensembl: ENSG00000153956
UCSC: uc003uhr.1
No. of Studies 2 (Positive: 0; Negative: 0; trend: 2)
Overlap with SZ? NO
Overlap with MDD? NO
Gene related studies (count: 2)
Reference Tested Markers Statistical Values/Author Comments Result Category Comment on Study
Winham S.J., 2014 SNP: rs2367911 rs2367911 in CACNA2D1 showed little evidence for association with BD. Trend Comment on Study
Smith, E. N.,2011 SNP: rs2367911 Suggestive association of this gene was found. Trend Comment on Study
Gene functional annotation
Gene related GO terms (count: 11)

GO terms by PBA (count: 3)

GO terms by database search (count: 8)

Gene related KEGG pathways (count: 1)

KEGG pathways by PBA (count: 1)

KEGG pathways by database search (count: 0)

Gene related BioCarta pathways (count: 0)

Gene related interactors from protein-protein interactions data in HPRD (count: 0)

Related other genetic factors
Gene related SNPs (count: 2)

Literature-origin SNPs (count: 1)

LD-proxies (count: 1)

Gene related CNVs (count: 0)

Gene related other variants (count: 0)

Gene related regions (count: 4)

Overlap with schizophrenia (SZ) and major depressive disorder (MDD)
Gene relationship with SZ

Gene relationship with MDD

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Region: chr7:81946444..82443798 View in gBrowse
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