Gene Report

Basic Info
Approved Symbol TOM1
Approved Name target of myb1 (chicken)
Previous Name target of myb1 (chicken) homolog
Location 22q13.1
Position chr22:35299275-35347994, 1
External Links HGNC: 11982
Entrez Gene: 10043
Ensembl: ENSG00000100284
UCSC: uc003anp.3
No. of Studies 1 (Positive: 1; Negative: 0; trend: 0)
Overlap with SZ? NO
Overlap with MDD? NO
Gene related studies (count: 1)
Reference Tested Markers Statistical Values/Author Comments Result Category Comment on Study
Potash, J. B., 2008 SNP: rs11703672, rs138764, rs138773, rs138781, rs138784, rs4462, rs4465, rs4467, rs4511, rs5750102, rs739015, rs743810, rs762967, rs9622182 A 3-marker haplotype of SNPs within TOM1 was associated with BPAD (allele-wise P=0.0011) and with psychotic BPAD (allele-wise P=0.00049). Positive Comment on Study
Gene functional annotation
Gene related GO terms (count: 12)

GO terms by PBA (count: 1)

GO terms by database search (count: 11)

Gene related KEGG pathways (count: 0)

Gene related BioCarta pathways (count: 0)

Gene related interactors from protein-protein interactions data in HPRD (count: 4)

Related other genetic factors
Gene related SNPs (count: 37)

Literature-origin SNPs (count: 14)

LD-proxies (count: 23)

Gene related CNVs (count: 0)

Gene related other variants (count: 0)

Gene related regions (count: 3)

Overlap with schizophrenia (SZ) and major depressive disorder (MDD)
Gene relationship with SZ

Gene relationship with MDD

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Region: chr22:35299275..35347994 View in gBrowse
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