SNP Report

Basic Info

Name	rs138727 dbSNP Ensembl
Location	chr22:35298900 - 35298900(1)
Variant Alleles	C/A
Ancestral Allele	C
Minor Allele	A
Minor Allele Frequence	0.451877
Functional Annotation	downstream_gene_variant; non_coding_transcript_exon_variant; non_coding_transcript_variant; upstream_gene_variant.
Consequence to Transcript	downstream_gene_variant(ENST00000216106, ENST00000418170); non_coding_transcript_exon_variant(ENST00000609073); non_coding_transcript_variant(ENST00000609073); upstream_gene_variant(ENST00000382034, ENST00000395736, ENST00000404284, ENST00000411850, ENST00000424387, ENST00000425375, ENST00000439512, ENST00000447733, ENST00000449058, ENST00000449508, ENST00000456128, ENST00000465529, ENST00000487670, ENST00000608674, ENST00000608749)
No. of Studies	0 (Positive: 0; Negative: 0; Trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 2)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
TOM1	target of myb1 (chicken)	22q13.1	1(1/0/0)
HMGXB4	HMG box domain containing 4	22q13	1(1/0/0)

SNPs in LD with rs138727 (count: 0) View in gBrowse (chr22:35298900..35298900 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)