BDgene

Region Report

Basic Info
Region Name 5q33
Chromosome Position chr5:150400000-160500000
No. of Studies (Positive/Negative/Trend)  2(0/1/1)

Region related studies (count: 2)
Reference Markers Statistical Values Author Comments Result Category
Jasinska, A. J.,2009 rs6863955, rs253602, rs7713029, rs10036026, rs9313827, rs2176297 Two-Point Parametric LOD score: For marker rs6863955, 0.4 fo...... Two-Point Parametric LOD score: For marker rs6863955, 0.4 for CVCR sample, 3.28 for CO sample, 1.78 for combined sample; For marker rs253602, 3.37 for CVCR sample, 0.57 for CO sample, 2.99 for combined sample; For marker rs7713029, 1.72 for CVCR sample, 1.72 for CO sample, 3.27 for combined sample; For marker rs10036026, 0.17 for CVCR sample, 3.29 for CO sample, 2.37 for combined sample; For marker rs9313827, 0.17 for CVCR sample, 3.29 for CO sample, 2.38 for combined sample; For marker rs2176297, 1.18 for CVCR sample, 2.19 for CO sample, 3.33 for combined sample More... Suggestive linkage was found in this region. Suggestive linkage was found in this region. Trend
Cheng, R.,2006 D5S820 Two point parametric linkage analysis: LOD = 1.68, theta = 0...... Two point parametric linkage analysis: LOD = 1.68, theta = 0, Model BP3, dom More... No significant linkage was found in this region. No significant linkage was found in this region. Negative

Region related genes (count: 10)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
SLU7 SLU7 splicing factor homolog (S. cerevisiae) 5q33.3 1(0/0/1)
NMUR2 neuromedin U receptor 2 5q33.1 1(0/1/0)
GLRA1 glycine receptor, alpha 1 5q33.1 1(1/0/0)
GRIA1 glutamate receptor, ionotropic, AMPA 1 5q33 2(2/0/0)
EBF1 early B-cell factor 1 5q34 1(1/0/0)
CCDC69 coiled-coil domain containing 69 5q33.1 1(1/0/0)
ADRA1B adrenoceptor alpha 1B 5q33.3 1(1/0/0)
GPX3 glutathione peroxidase 3 5q33.1 1(1/0/0)
LSM11 LSM11, U7 small nuclear RNA associated 5q33.3 1(1/0/0)
ITK IL2-inducible T-cell kinase 5q31-q32 1(1/0/0)

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