BDgene

GO Report

Basic Info
ID GO:0005262
Name calcium channel activity
Type molecular function
No. of Genes in BDgene  9
Source Pathway by PBA

PBA Result
Pathway Name in Paper Source Reference Data Set Tool Result Parameters Result Link
GO: 0005262: Ca2+ channel act. PBA paper Askland, K.,2009 WTCCC Frequentist genotypic Fisher's exact test P < 0.05 from the WTCCC PBAs
CALCIUM CHANNEL ACTIVITY i-GSEA analysis From NIMH Trinity College Dublin i-GSEA by using i-GSEA4GWAS P-value< 0.001, FDR=0.033 Link in i-GSEA4GWAS
GO: 0005262: Ca2+ channel act. PBA paper Askland, K.,2009 NIMH Fisher's exact test Results given for gene sets with P < 0.05 from the NIMH PBA; Molecular function
GO: 0005262: Ca2+ channel act. PBA paper Askland, K.,2009 WTCCC Bayesian genotypic Fisher's exact test P < 0.05 from the WTCCC PBAs

GO related genes in BDgene (count: 9)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend) Evidence[PMID]
CACNB2 calcium channel, voltage-dependent, beta 2 subunit 10p12 3(2/1/0) NAS[9594024]
GRIN2B glutamate receptor, ionotropic, N-methyl D-aspartate 2B 12p13.1 8(4/4/0) IEA
CHRNA9 cholinergic receptor, nicotinic, alpha 9 (neuronal) 4p14 2(0/2/0) IEA
TRPM2 transient receptor potential cation channel, subfamily M, member 2 21q22.3 5(3/2/0) IEA
GRIN2A glutamate receptor, ionotropic, N-methyl D-aspartate 2A 16p13.2 1(1/0/0) IEA
GRIN3A glutamate receptor, ionotropic, N-methyl-D-aspartate 3A 9q31.1 1(0/1/0) IEA
CHRNA10 cholinergic receptor, nicotinic, alpha 10 (neuronal) 11p15.5 1(0/1/0) IEA
RYR2 ryanodine receptor 2 (cardiac) 1q43 1(1/0/0) ISS
GRIN1 glutamate receptor, ionotropic, N-methyl D-aspartate 1 9q34.3 3(2/1/0) IDA[7685113]