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GO Report
Basic Info
| ID | GO:0004879 |
|---|---|
| Name | ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity |
| Type | molecular function |
| No. of Genes in BDgene | 7 |
| Source | Pathway by PBA |
PBA Result
| Pathway Name in Paper | Source | Reference | Data Set | Tool | Result Parameters | Result Link |
|---|---|---|---|---|---|---|
| GO: 0004879: ligand-dependent nuclear receptor act. | PBA paper | Askland, K.,2009 | WTCCC Frequentist genotypic | Fisher's exact test | P < 0.05 from the WTCCC PBAs | |
| GO: 0004879: ligand-dependent nuclear receptor act. | PBA paper | Askland, K.,2009 | WTCCC Bayesian genotypic | Fisher's exact test | P < 0.05 from the WTCCC PBAs |
GO related genes in BDgene (count: 7)
| Approved Symbol | Approved Name | Location | No. of Studies (Positive/Negative/Trend)  |
Evidence[PMID] |
|---|---|---|---|---|
| AHR | aryl hydrocarbon receptor | 7p15 | 1(1/0/0) | IDA[10395741] |
| NR4A2 | nuclear receptor subfamily 4, group A, member 2 | 2q22-q23 | 1(0/1/0) | IEA |
| NR1D1 | nuclear receptor subfamily 1, group D, member 1 | 17q11.2 | 6(2/4/0) | TAS[8622974] |
| HNF4A | hepatocyte nuclear factor 4, alpha | 20q13.12 | 1(1/0/0) | IEA |
| PPARD | peroxisome proliferator-activated receptor delta | 6p21.2 | 1(1/0/0) | IDA[12955147] |
| RORA | RAR-related orphan receptor A | 15q21-q22 | 3(2/1/0) | IEA |
| RORB | RAR-related orphan receptor B | 9q22 | 4(3/1/0) | IEA |