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SNP Report
Name | rs778293 dbSNP Ensembl |
---|---|
Location | chr13:105516850 - 105516850(1) |
Variant Alleles | C/T |
Ancestral Allele | C |
Minor Allele | C |
Minor Allele Frequence | 0.434904 |
No. of Studies | 6 (Positive: 2; Negative: 4; Trend: 0) |
Source | Literature |
Overlap with SZ? | YES |
Overlap with MDD? | NO |
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2<=0.8.
Reference | Statistical Result | Description | Result Category |
---|---|---|---|
Bass, N. J.,2009 | chi-squared tests:for SCZ, allele, X2(1 d.f.)=0.93, P-value = 0.335 | No significant association was observed. | Negative |
Williams, N. M., 2006 | allelic P-value = 0.44 in Schizophrenia | We found no evidence for allelic or genotypic association with any of the polymorphisms studied for schizophrenia. We observed nominally significant evidence (P=.01-.047) for allelic association with 3 of the polymorphisms for bipolar disorder and significant evidence for whole-gene association (P=.04). | Negative |
Detera-Wadleigh, S. D., 2006 | Fisher P-value = 0.0003 for all, P-value = 0.0033 for SCZ Only | When results are combined across studies and phenotypes, this marker showed significant combined p value. Combined results in schizophrenia are significant for several markers. | Positive |