BDgene

Region Report

Basic Info
Region Name 2p25
Chromosome Position chr2:0-12000000
No. of Studies (Positive/Negative/Trend)  3(0/1/2)

Region related studies (count: 3)
Reference Markers Statistical Values Author Comments Result Category
Service, S.,2006 rs1309, rs728282, rs730990 Two point parametric linkage analysis: for marker rs1309, L...... Two point parametric linkage analysis: for marker rs1309, LOD = 1.0741; for marker rs728282, LOD = 1.0741; for marker rs730990, LOD = 1.1316 More... No significant linkage was found in this region. No significant linkage was found in this region. Negative
Georgi, B., 2014 D2S2211 expLOD=3.01 expLOD=3.01 The analysis of subpedigrees yielded nominally significant l...... The analysis of subpedigrees yielded nominally significant linkage peaks on 2p25 (expLOD 3.01 at D2S2211, Narrow phenotype) observed within subpedigree 310/ 410. More... Trend
Cassidy, F.,2007 SraP Multipoint Linkage Analysis: Broad model, NPL = 1.30302, P-v...... Multipoint Linkage Analysis: Broad model, NPL = 1.30302, P-value = 0.096817; Structure-Guided Linkage Analysis: Broad model: NPL = 1.56, P-value = 0.06 for all families.; NPL = 2.35, P-value = 0.01 for families.; Narrow model: NPL = 0.31, P-value = 0.37 for all families.; NPL = 0.53, P_value = 0.29 for 60% homogeneous families. More... There is a trend for Significant linkage. There is a trend for Significant linkage. Trend

Region related genes (count: 5)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
SNTG2 syntrophin, gamma 2 2p25 1(0/0/1)
MYT1L myelin transcription factor 1-like 2p25.3 1(1/0/0)
LPIN1 lipin 1 2p25.1 1(0/0/1)
TRAPPC12 trafficking protein particle complex 12 2p25.3 1(0/0/1)
NTSR2 neurotensin receptor 2 2p25.1 1(1/0/0)

View in gBrowse

Region: chr2:0..12000000 View in gBrowse
View in gBrowse