Gene Report

Basic Info
Approved Symbol VAPA
Symbol Alias hVAP-33, VAP-A
Approved Name VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa
Previous Name VAMP (vesicle-associated membrane protein)-associated protein A (33kD)
Location 18p11.2
Position chr18:9914002-9960021, 1
External Links HGNC: 12648
Entrez Gene: 9218
Ensembl: ENSG00000101558
UCSC: uc002koj.3
No. of Studies 1 (Positive: 1; Negative: 0; trend: 0)
Overlap with SZ? NO
Overlap with MDD? NO
Gene related studies (count: 1)
Reference Tested Markers Statistical Values/Author Comments Result Category Comment on Study
Lohoff, F. W., 2008 (b) SNP: rs29066, rs29067, rs29145, rs29162, rs29193, rs494015
Haplotype: common haplotypes (ACA ), common haplotypes (CAC ), common haplotypes (AAA ), common haplotypes (CAA ), common haplotypes (AA ), common haplotypes (CC )
Our results provide suggestive evidence of an association between SNPs in the 3' UTR of the VAPA gene and BPD. Positive Comment on Study
Gene functional annotation
Gene related GO terms (count: 32)

GO terms by PBA (count: 5)

GO terms by database search (count: 27)

Gene related KEGG pathways (count: 1)

KEGG pathways by PBA (count: 1)

KEGG pathways by database search (count: 0)

Gene related BioCarta pathways (count: 0)

Gene related interactors from protein-protein interactions data in HPRD (count: 4)

Related other genetic factors
Gene related SNPs (count: 18)

Literature-origin SNPs (count: 6)

LD-proxies (count: 12)

Gene related CNVs (count: 0)

Gene related other variants (count: 0)

Gene related regions (count: 5)

Overlap with schizophrenia (SZ) and major depressive disorder (MDD)
Gene relationship with SZ

Gene relationship with MDD

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Region: chr18:9914002..9960021 View in gBrowse
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