BDgene

Gene Report

Basic Info
Approved Symbol NDST3
Symbol Alias HSST3
Approved Name N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3
Location 4q26
Position chr4:118033618-118258648, 1
External Links HGNC: 7682
Entrez Gene: 9348
Ensembl: ENSG00000164100
UCSC: uc003ibx.3
No. of Studies 1 (Positive: 1; Negative: 0; trend: 0)
Overlap with SZ? YES
Overlap with MDD? NO
Gene related studies (count: 1)
Reference Tested Markers Statistical Values/Author Comments Result Category Comment on Study
Lencz, T., 2013 SNP: rs11098403 The SNP rs11098403 of gene NDST3 is a novel genome-wide significant risk locus at chromosome 4q26 and is significantly associated with schizophrenia and bipolar disorder. Positive Comment on Study
Gene functional annotation
Gene related GO terms (count: 6)

GO terms by PBA (count: 1)

GO terms by database search (count: 5)


Gene related KEGG pathways (count: 2)

KEGG pathways by PBA (count: 2)

KEGG pathways by database search (count: 0)


Gene related BioCarta pathways (count: 0)

Gene related interactors from protein-protein interactions data in HPRD (count: 0)

Related other genetic factors
Gene related SNPs (count: 131)

Literature-origin SNPs (count: 6)

LD-proxies (count: 125)


Gene related CNVs (count: 0)

Gene related other variants (count: 0)

Gene related regions (count: 2)

Overlap with schizophrenia (SZ) and major depressive disorder (MDD)
Gene relationship with SZ

Overlap with SZ from cross-disorder studies (count: 1)

Overlap with SZ from candidate gene intersection analysis (count: 0)


Gene relationship with MDD

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Region: chr4:118033618..118258648 View in gBrowse
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