BDgene

SNP Report

Basic Info
Name rs17216041 dbSNP Ensembl
Location chr19:19255834 - 19255834(1)
Variant Alleles G/A
Ancestral Allele G
Minor Allele A
Minor Allele Frequence 0.124201
Functional Annotation 3_prime_UTR_variant; downstream_gene_variant; non_coding_transcript_exon_variant; non_coding_transcript_variant.
Consequence to Transcript 3_prime_UTR_variant(ENST00000291481); downstream_gene_variant(ENST00000252575, ENST00000592862); non_coding_transcript_exon_variant(ENST00000586064, ENST00000624068); non_coding_transcript_variant(ENST00000586064, ENST00000624068)
No. of Studies 0 (Positive: 0; Negative: 0; Trend: 0)
Source LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 2)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
HAPLN4 hyaluronan and proteoglycan link protein 4 19p13.1 Mapped by Literature SNP
NCAN neurocan 19p12 1(1/0/0)

SNPs in LD with rs17216041 (count: 0) View in gBrowse (chr19:19255834..19255834 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)