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Gene Report
Basic information | Related studies | Functional annotation | Related other genetic factors | Overlap with SZ and MDD | ADD to My Gene Set | Comment on Gene | View All Comments on Gene |
Approved Symbol | SVIL |
---|---|
Approved Name | supervillin |
Name Alias | archvillin |
Location | 10p11.2 |
Position | chr10:29457338-29736781, -1 |
External Links |
HGNC: 11480 Entrez Gene: 6840 Ensembl: ENSG00000197321 UCSC: uc001iut.1 |
No. of Studies | 1 (Positive: 0; Negative: 1; trend: 0) |
Overlap with SZ? | NO |
Overlap with MDD? | NO |
Reference | Tested Markers | Statistical Values/Author Comments | Result Category | Comment on Study |
---|---|---|---|---|
Xu, W., 2014 | SNP: rs12773173 | The SNP within or near this gene did not achieve genome-wide significance. | Negative | Comment on Study |
GO terms by PBA (count: 3)

ID | Name | Type | Evidence[PMID] | No. of Genes in BDgene |
---|---|---|---|---|
GO:0005634 | nucleus | cellular component | IDA[12711699] | 283 |
GO:0005886 | plasma membrane | cellular component | IDA | 360 |
GO:0051015 | actin filament binding | molecular function | IDA[12711699] | 9 |
GO terms by database search (count: 13)

ID | Name | Type | Evidence[PMID] | No. of Genes in BDgene |
---|---|---|---|---|
GO:0005737 | cytoplasm | cellular component | IDA | 322 |
GO:0030496 | midbody | cellular component | ISS | 8 |
GO:0005515 | protein binding | molecular function | IPI[18639526] | 563 |
GO:0043034 | costamere | cellular component | IDA[12711699] | 4 |
GO:0071437 | invadopodium | cellular component | IEA | 1 |
GO:0032154 | cleavage furrow | cellular component | ISS | 2 |
GO:0007519 | skeletal muscle tissue development | biological process | IMP[12711699] | 6 |
GO:0032467 | positive regulation of cytokinesis | biological process | ISS | 8 |
GO:0036449 | microtubule minus-end | cellular component | ISS | 1 |
GO:0002102 | podosome | cellular component | IEA | 3 |
GO:0005925 | focal adhesion | cellular component | IDA[21423176] | 32 |
GO:0015629 | actin cytoskeleton | cellular component | IDA; NAS[9867483] | 18 |
GO:0007010 | cytoskeleton organization | biological process | IEA | 11 |
Literature-origin SNPs (count: 1)

rs_ID | Location | Functional Annotation | No. of Studies (Positive/Negative/Trend) ![]() |
---|---|---|---|
rs12773173 | chr10:29722375 - 29722375(1) | intron_variant; non_coding_transcript_variant | 1(0/1/0) |
LD-proxies (count: 0)
Region Name | Position | No. of Studies (Positive/Negative/Trend) ![]() |
---|---|---|
10p11-p14 | chr10:6600000-39800000 | 1 (0/1/0) |
Chr 10 | chr10:0-133797422 | 3 (0/2/1) |
Region: chr10:29457338..29736781 View in gBrowse
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Acknowledgements
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Last update: March 31, 2016