BDgene

Gene Report

Basic Info
Approved Symbol STK39
Symbol Alias DCHT, SPAK
Approved Name serine threonine kinase 39
Name Alias STE20/SPS1 homolog (yeast)
Location 2q24.3
Position chr2:167954020-168248141, -1
External Links HGNC: 17717
Entrez Gene: 27347
Ensembl: ENSG00000198648
UCSC: uc002uea.3
No. of Studies 2 (Positive: 0; Negative: 2; trend: 0)
Overlap with SZ? NO
Overlap with MDD? NO
Gene related studies (count: 2)
Reference Tested Markers Statistical Values/Author Comments Result Category Comment on Study
Sklar, P.,2011 SNP: rs4668059 No significant association was observed. Negative Comment on Study
Green, E. K.,2012 SNP: rs4668059 BD ImmunoChip:P-value = 0.731,OR = 1.026;ImmunoChip, PGC-BD combined data:P-balue = 0.00023,OR = 1.107 No significant association was observed. Negative Comment on Study
Gene functional annotation
Gene related GO terms (count: 23)

GO terms by PBA (count: 2)

GO terms by database search (count: 21)


Gene related KEGG pathways (count: 0)

Gene related BioCarta pathways (count: 0)

Gene related interactors from protein-protein interactions data in HPRD (count: 8)

Related other genetic factors
Gene related SNPs (count: 1)

Literature-origin SNPs (count: 1)

LD-proxies (count: 0)


Gene related CNVs (count: 0)

Gene related other variants (count: 0)

Gene related regions (count: 5)

Overlap with schizophrenia (SZ) and major depressive disorder (MDD)
Gene relationship with SZ

Gene relationship with MDD

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Region: chr2:167954020..168248141 View in gBrowse
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