rs_ID |
Literature-origin SNPs with LD |
Functional Annotation |
r2[population] |
rs4068401
|
|
intron_variant; NMD_transcript_variant; non_coding_transcript_variant |
1.0[CHB]; 1.0[JPT]
|
rs2152922
|
|
intron_variant; NMD_transcript_variant; non_coding_transcript_variant |
1.0[CHB]; 0.867[JPT]
|
rs11122125
|
|
intron_variant; NMD_transcript_variant; non_coding_transcript_variant |
0.825[CHB]; 1.0[CHD]; 0.935[JPT]
|
rs11121956
|
|
intron_variant; NMD_transcript_variant; non_coding_transcript_exon_variant; non_coding_transcript_variant; upstream_gene_variant |
0.824[CHB]; 0.873[JPT]
|
rs12079601
|
|
downstream_gene_variant; intron_variant; NMD_transcript_variant; non_coding_transcript_exon_variant; non_coding_transcript_variant |
0.809[CHB]; 0.941[CHD]
|
rs12745395
|
|
intron_variant; NMD_transcript_variant; non_coding_transcript_variant |
0.936[CHB]; 0.97[CHD]; 1.0[JPT]
|
rs4908638
|
|
intron_variant; NMD_transcript_variant; non_coding_transcript_variant |
1.0[CHB]; 1.0[JPT]
|
rs806108
|
|
intron_variant; NMD_transcript_variant; non_coding_transcript_variant; upstream_gene_variant |
0.933[CHB]; 0.872[JPT]
|
rs1295111
|
|
intron_variant; NMD_transcript_variant; non_coding_transcript_variant |
0.936[CHB]; 1.0[JPT]
|
rs806111
|
|
intron_variant; non_coding_transcript_variant; upstream_gene_variant |
0.933[CHB]; 0.97[CHD]; 1.0[JPT]
|
rs1295101
|
|
intron_variant; non_coding_transcript_variant; upstream_gene_variant |
0.933[CHB]; 0.941[CHD]; 1.0[JPT]
|
rs11588889
|
|
intron_variant; NMD_transcript_variant; non_coding_transcript_variant |
1.0[CHB]; 1.0[CHD]; 1.0[JPT]
|
rs11120871
|
|
intron_variant; NMD_transcript_variant; non_coding_transcript_variant |
0.934[CHB]; 0.866[JPT]
|
rs3747992
|
|
3_prime_UTR_variant; downstream_gene_variant; NMD_transcript_variant; non_coding_transcript_exon_variant; non_coding_transcript_variant; synonymous_variant; upstream_gene_variant |
0.941[CHD]; 0.873[JPT]
|
rs962662
|
|
intron_variant; NMD_transcript_variant; non_coding_transcript_variant |
0.878[CHB]; 0.873[JPT]
|
rs6660956
|
|
intron_variant; NMD_transcript_variant; non_coding_transcript_variant |
0.936[CHB]; 0.873[JPT]
|
rs875574
|
|
intron_variant; NMD_transcript_variant; non_coding_transcript_variant |
1.0[CHB]; 1.0[CHD]; 1.0[JPT]
|
rs12033563
|
|
intron_variant; NMD_transcript_variant; non_coding_transcript_variant |
0.936[CHB]; 0.97[CHD]; 0.935[JPT]
|
rs3747988
|
|
downstream_gene_variant; intron_variant; NMD_transcript_variant; non_coding_transcript_exon_variant; non_coding_transcript_variant; upstream_gene_variant |
0.97[CHD]; 0.873[JPT]
|
rs869107
|
|
intron_variant; NMD_transcript_variant; non_coding_transcript_variant |
0.936[CHB]; 0.934[JPT]
|
rs4068399
|
|
intron_variant; NMD_transcript_variant; non_coding_transcript_variant |
1.0[CHB]; 1.0[CHD]; 1.0[JPT]
|
rs1566724
|
|
intron_variant; NMD_transcript_variant; non_coding_transcript_variant |
1.0[CHB]; 0.873[JPT]
|
rs11120772
|
|
intron_variant; NMD_transcript_variant; non_coding_transcript_variant |
0.936[CHB]; 0.935[JPT]
|
rs11120934
|
|
intron_variant; NMD_transcript_variant; non_coding_transcript_variant |
0.869[CHB]; 0.873[JPT]
|
rs2312464
|
|
intron_variant; NMD_transcript_variant; non_coding_transcript_variant |
0.809[CHB]; 0.812[JPT]
|
rs11120832
|
|
intron_variant; NMD_transcript_variant; non_coding_transcript_variant |
0.936[CHB]; 0.812[JPT]
|
rs7549324
|
|
intron_variant; NMD_transcript_variant; non_coding_transcript_variant |
0.936[CHB]; 0.939[CHD]; 0.935[JPT]
|