SNP Report

Basic Info

Name	rs3747992 dbSNP Ensembl
Location	chr1:5877108 - 5877108(1)
Variant Alleles	G/A
Ancestral Allele	G
Minor Allele	A
Minor Allele Frequence	0.453474
Functional Annotation	3_prime_UTR_variant; downstream_gene_variant; NMD_transcript_variant; non_coding_transcript_exon_variant; non_coding_transcript_variant; synonymous_variant; upstream_gene_variant.
Consequence to Transcript	3_prime_UTR_variant(ENST00000378169, ENST00000489180); downstream_gene_variant(ENST00000622020); NMD_transcript_variant(ENST00000378169, ENST00000489180); non_coding_transcript_exon_variant(ENST00000470763, ENST00000478423, ENST00000506941); non_coding_transcript_variant(ENST00000470763, ENST00000478423, ENST00000506941); synonymous_variant(ENST00000378156); upstream_gene_variant(ENST00000468253)
No. of Studies	0 (Positive: 0; Negative: 0; Trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (Positive/Negative/Trend)
NPHP4	nephronophthisis 4	1p36	1(1/0/0)

SNPs in LD with rs3747992 (count: 0) View in gBrowse (chr1:5877108..5877108 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)