BDgene

SNP Report

Basic Info
Name rs875574 dbSNP Ensembl
Location chr1:5967107 - 5967107(1)
Variant Alleles C/A
Ancestral Allele C
Minor Allele C
Minor Allele Frequence 0.310304
Functional Annotation intron_variant; NMD_transcript_variant; non_coding_transcript_variant.
Consequence to Transcript intron_variant(ENST00000378156, ENST00000378169, ENST00000478423, ENST00000489180, ENST00000622020); NMD_transcript_variant(ENST00000378169, ENST00000489180); non_coding_transcript_variant(ENST00000478423)
No. of Studies 0 (Positive: 0; Negative: 0; Trend: 0)
Source LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)
Approved Symbol Approved Name Location No. of Studies (Positive/Negative/Trend)
NPHP4 nephronophthisis 4 1p36 1(1/0/0)

SNPs in LD with rs875574 (count: 0) View in gBrowse (chr1:5967107..5967107 )

Overlap with SZ from cross-disorder studies (count: 0)

Overlap with MDD from cross-disorder studies (count: 0)