BDgene

Gene Report

Basic Info
Approved Symbol VCL
Approved Name vinculin
Name Alias metavinculin
Location 10q22.1-q23
Position chr10:73995193-74121363, 1
External Links HGNC: 12665
Entrez Gene: 7414
Ensembl: ENSG00000035403
UCSC: uc001jwd.3
No. of Studies 1 (Positive: 0; Negative: 0; trend: 1)
Overlap with SZ? NO
Overlap with MDD? NO
Gene related studies (count: 1)
Reference Tested Markers Statistical Values/Author Comments Result Category Comment on Study
Georgi, B., 2014 SNP: rs71579374 Amish-specific putative damaging exonic missense variant was found within this gene. Trend Comment on Study
Gene functional annotation
Gene related GO terms (count: 38)

GO terms by PBA (count: 5)

GO terms by database search (count: 33)


Gene related KEGG pathways (count: 4)

KEGG pathways by PBA (count: 1)

KEGG pathways by database search (count: 3)


Gene related BioCarta pathways (count: 3)

BioCarta pathways by PBA (count: 0)

BioCarta pathways by database search (count: 3)


Gene related interactors from protein-protein interactions data in HPRD (count: 23)

Related other genetic factors
Gene related SNPs (count: 1)

Literature-origin SNPs (count: 1)

LD-proxies (count: 0)


Gene related CNVs (count: 0)

Gene related other variants (count: 0)

Gene related regions (count: 3)

Overlap with schizophrenia (SZ) and major depressive disorder (MDD)
Gene relationship with SZ

Gene relationship with MDD

View in gBrowse

Region: chr10:73995193..74121363 View in gBrowse
View in gBrowse