Gene Report

Basic Info
Approved Symbol SNCG
Symbol Alias BCSG1, SR, persyn
Approved Name synuclein, gamma (breast cancer-specific protein 1)
Name Alias synoretin
Location 10q23.2-q23.3
Position chr10:86958618-86963260, 1
External Links HGNC: 11141
Entrez Gene: 6623
Ensembl: ENSG00000173267
UCSC: uc001keb.2
No. of Studies 1 (Positive: 0; Negative: 1; trend: 0)
Overlap with SZ? YES
Overlap with MDD? NO
Gene related studies (count: 1)
Reference Tested Markers Statistical Values/Author Comments Result Category Comment on Study
Fallin, M. D.,2005 5 SNP typed, Median D'=0.11, Median r<sup>2</sup> =0.01, 4 LD blocks, 0.01 block coverage, all SNP or haplotype P-value > 0.05 in BP and SZ/SZA.. This gene is not suggestive to BP. Negative Comment on Study
Gene functional annotation
Gene related GO terms (count: 20)

GO terms by PBA (count: 2)

GO terms by database search (count: 18)

Gene related KEGG pathways (count: 0)

Gene related BioCarta pathways (count: 0)

Gene related interactors from protein-protein interactions data in HPRD (count: 5)

Related other genetic factors
Gene related SNPs (count: 0)

Gene related CNVs (count: 0)

Gene related other variants (count: 0)

Gene related regions (count: 4)

Overlap with schizophrenia (SZ) and major depressive disorder (MDD)
Gene relationship with SZ

Overlap with SZ from cross-disorder studies (count: 1)

Overlap with SZ from candidate gene intersection analysis (count: 1)

Gene relationship with MDD

View in gBrowse

Region: chr10:86958618..86963260 View in gBrowse
View in gBrowse