Gene Report

Basic Info
Approved Symbol PTPRN2
Symbol Alias KIAA0387, phogrin, ICAAR, IA-2beta
Approved Name protein tyrosine phosphatase, receptor type, N polypeptide 2
Name Alias IAR PTPRP
Location 7q36
Position chr7:157539056-158587788, -1
External Links HGNC: 9677
Entrez Gene: 5799
Ensembl: ENSG00000155093
UCSC: uc003wno.3
No. of Studies 1 (Positive: 0; Negative: 0; trend: 1)
Overlap with SZ? YES
Overlap with MDD? NO
Gene related studies (count: 1)
Reference Tested Markers Statistical Values/Author Comments Result Category Comment on Study
Curtis, D.,2011 SNP: rs6459804, rs6459806 There is a trend of this gene for significant association. Trend Comment on Study
Gene functional annotation
Gene related GO terms (count: 10)

GO terms by PBA (count: 3)

GO terms by database search (count: 7)

Gene related KEGG pathways (count: 1)

KEGG pathways by PBA (count: 0)

KEGG pathways by database search (count: 1)

Gene related BioCarta pathways (count: 0)

Gene related interactors from protein-protein interactions data in HPRD (count: 3)

Related other genetic factors
Gene related SNPs (count: 4)

Literature-origin SNPs (count: 2)

LD-proxies (count: 2)

Gene related CNVs (count: 0)

Gene related other variants (count: 0)

Gene related regions (count: 4)

Overlap with schizophrenia (SZ) and major depressive disorder (MDD)
Gene relationship with SZ

Overlap with SZ from cross-disorder studies (count: 1)

Overlap with SZ from candidate gene intersection analysis (count: 0)

Gene relationship with MDD

View in gBrowse

Region: chr7:157539056..158587788 View in gBrowse
View in gBrowse