Gene Report

Basic Info
Approved Symbol HLA-A
Approved Name major histocompatibility complex, class I, A
Location 6p21.3
Position chr6:29941260-29945884, 1
External Links HGNC: 4931
Entrez Gene: 3105
Ensembl: ENSG00000206503
UCSC: uc003nol.3
No. of Studies 1 (Positive: 0; Negative: 1; trend: 0)
Overlap with SZ? NO
Overlap with MDD? NO
Gene related studies (count: 1)
Reference Tested Markers Statistical Values/Author Comments Result Category Comment on Study
Jun, T. Y.,2002 Other variant: HLA-A_polymorphism The results of the present study suggest that HLA alleles may not confer susceptibility to bipolar disorder in the Korean population. Negative Comment on Study
Gene functional annotation
Gene related GO terms (count: 42)

GO terms by PBA (count: 4)

GO terms by database search (count: 38)

Gene related KEGG pathways (count: 7)

KEGG pathways by PBA (count: 1)

KEGG pathways by database search (count: 6)

Gene related BioCarta pathways (count: 3)

BioCarta pathways by PBA (count: 0)

BioCarta pathways by database search (count: 3)

Gene related interactors from protein-protein interactions data in HPRD (count: 20)

Related other genetic factors
Gene related SNPs (count: 2)

Literature-origin SNPs (count: 0)

LD-proxies (count: 2)

Gene related CNVs (count: 0)

Gene related other variants (count: 1)

Gene related regions (count: 3)

Overlap with schizophrenia (SZ) and major depressive disorder (MDD)
Gene relationship with SZ

Gene relationship with MDD

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Region: chr6:29941260..29945884 View in gBrowse
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